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  5. LOC_Os06g07200.1

LOC_Os06g07200.1 (SYP132, ATSYP132,...)


Aliases : SYP132, ATSYP132, LOC_Os06g07200

Description : SYP1-group Qa-type SNARE component


Gene families : OG0000392 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000392_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g07200.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00050990 SYP121,... Vesicle trafficking.SNARE target membrane recognition... 0.04 OrthoFinder output from all 47 species
AMTR_s00111p00136390 ATSYP124,... Vesicle trafficking.SNARE target membrane recognition... 0.03 OrthoFinder output from all 47 species
AT3G03800 ATSYP131, SYP131 syntaxin of plants 131 0.04 OrthoFinder output from all 47 species
AT3G11820 SYP121,... syntaxin of plants 121 0.08 OrthoFinder output from all 47 species
AT3G52400 SYP122, ATSYP122 syntaxin of plants 122 0.06 OrthoFinder output from all 47 species
Adi_g004466 SYP132, ATSYP132 Qa-type SYP1-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Adi_g081976 SYP125, ATSYP125 Qa-type SYP1-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Ala_g08621 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Als_g11023 SYP132, ATSYP132 Qa-type SYP1-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Als_g40011 SYP125, ATSYP125 Qa-type SYP1-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Aop_g20584 SYP125, ATSYP125 Qa-type SYP1-group component of SNARE membrane fusion... 0.04 OrthoFinder output from all 47 species
Aspi01Gene17536.t1 SYP132,... Qa-type SYP1-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Azfi_s0220.g058684 SYP125, ATSYP125 Qa-type SYP1-group component of SNARE membrane fusion... 0.04 OrthoFinder output from all 47 species
Ceric.09G096900.1 SYP125,... Qa-type SYP1-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Ceric.10G023900.1 SYP125,... Qa-type SYP1-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Ceric.22G024200.1 ATSYP124,... Qa-type SYP1-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Dde_g18785 SYP125, ATSYP125 Qa-type SYP1-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Ehy_g12752 SYP121,... Qa-type SYP1-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
GSVIVT01030578001 ATSYP124, SYP124 Vesicle trafficking.SNARE target membrane recognition... 0.03 OrthoFinder output from all 47 species
Gb_27100 ATSYP124, SYP124 Qa-SNARE component KNOLLE of SNARE cell-plate vesicle... 0.04 OrthoFinder output from all 47 species
LOC_Os03g57310.1 SYP121,... SYP1-group Qa-type SNARE component 0.05 OrthoFinder output from all 47 species
Len_g16913 SYP125, ATSYP125 Qa-type SYP1-group component of SNARE membrane fusion... 0.05 OrthoFinder output from all 47 species
Lfl_g05313 SYP125, ATSYP125 Qa-type SYP1-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
MA_28961g0010 SYP125, ATSYP125 SYP1-group Qa-type SNARE component 0.04 OrthoFinder output from all 47 species
MA_6119g0010 ATSYP124, SYP124 Qa-SNARE component KNOLLE of SNARE cell-plate vesicle... 0.02 OrthoFinder output from all 47 species
Mp6g00050.1 SYP125, ATSYP125 SYP1-group Qa-type SNARE component 0.02 OrthoFinder output from all 47 species
Msp_g24420 SYP125, ATSYP125 Qa-type SYP1-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Nbi_g08359 SYP125, ATSYP125 Qa-type SYP1-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Pir_g04642 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Pnu_g08068 SYP125, ATSYP125 Qa-type SYP1-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Pnu_g10400 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Ppi_g01001 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g004207 SYP125, ATSYP125 Qa-type SYP1-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Sam_g11700 No alias Qa-type SYP1-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Sam_g36661 No alias Qa-type SYP1-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Solyc01g006950.3.1 SYP121,... SYP1-group Qa-type SNARE component 0.03 OrthoFinder output from all 47 species
Solyc10g081850.3.1 SYP121,... SYP1-group Qa-type SNARE component 0.09 OrthoFinder output from all 47 species
Solyc12g005580.2.1 ATSYP124,... SYP1-group Qa-type SNARE component 0.02 OrthoFinder output from all 47 species
Spa_g36395 SYP121,... Qa-type SYP1-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Spa_g48264 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Tin_g28595 SYP125, ATSYP125 Qa-type SYP1-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Zm00001e011907_P001 SYP121,... no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e018305_P001 SYP132,... SYP1-group Qa-type SNARE component 0.04 OrthoFinder output from all 47 species
Zm00001e030621_P001 ATSYP124,... SYP1-group Qa-type SNARE component 0.02 OrthoFinder output from all 47 species
Zm00001e037387_P002 ATSYP124,... SYP1-group Qa-type SNARE component 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000727 T_SNARE_dom 245 297
IPR006011 Syntaxin_N 40 244
No external refs found!