LOC_Os06g06960.1 (LOC_Os06g06960)

Aliases : LOC_Os06g06960

Description : protein kinase (SD-2)

Gene families : OG0000553 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000553_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os06g06960.1
Cluster	HCCA: Cluster_69

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00005p00228760	evm_27.TU.AmTr_v1...	Enzyme classification.EC_2 transferases.EC_2.7...	0.03	OrthoFinder output from all 47 species
AMTR_s00005p00228790	evm_27.TU.AmTr_v1...	No description available	0.05	OrthoFinder output from all 47 species
AMTR_s00075p00034690	evm_27.TU.AmTr_v1...	Protein modification.phosphorylation.TKL kinase...	0.02	OrthoFinder output from all 47 species
Aev_g25881	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.04	OrthoFinder output from all 47 species
Ala_g03007	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g15246	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.04	OrthoFinder output from all 47 species
Aspi01Gene51660.t1	Aspi01Gene51660	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Aspi01Gene61663.t1	Aspi01Gene61663	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Cba_g71886	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Ceric.02G083300.1	Ceric.02G083300	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Dde_g23985	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Ehy_g17461	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
GSVIVT01009410001	No alias	Putative receptor protein kinase ZmPK1 OS=Zea mays	0.03	OrthoFinder output from all 47 species
GSVIVT01009412001	No alias	Putative receptor protein kinase ZmPK1 OS=Zea mays	0.03	OrthoFinder output from all 47 species
GSVIVT01009414001	No alias	Putative receptor protein kinase ZmPK1 OS=Zea mays	0.03	OrthoFinder output from all 47 species
GSVIVT01009418001	No alias	Putative receptor protein kinase ZmPK1 OS=Zea mays	0.05	OrthoFinder output from all 47 species
GSVIVT01009421001	RLK4	G-type lectin S-receptor-like serine/threonine-protein...	0.04	OrthoFinder output from all 47 species
GSVIVT01009422001	No alias	Putative receptor protein kinase ZmPK1 OS=Zea mays	0.04	OrthoFinder output from all 47 species
GSVIVT01034078001	No alias	Putative receptor protein kinase ZmPK1 OS=Zea mays	0.03	OrthoFinder output from all 47 species
GSVIVT01034080001	No alias	No description available	0.04	OrthoFinder output from all 47 species
GSVIVT01034086001	No alias	Putative receptor protein kinase ZmPK1 OS=Zea mays	0.07	OrthoFinder output from all 47 species
Gb_09242	No alias	protein kinase (SD-2)	0.02	OrthoFinder output from all 47 species
Gb_35753	No alias	protein kinase (SD-2)	0.02	OrthoFinder output from all 47 species
Gb_37078	No alias	protein kinase (SD-2)	0.06	OrthoFinder output from all 47 species
Gb_37079	No alias	Putative receptor protein kinase ZmPK1 OS=Zea mays...	0.02	OrthoFinder output from all 47 species
LOC_Os01g47900.1	LOC_Os01g47900	protein kinase (SD-2)	0.03	OrthoFinder output from all 47 species
LOC_Os03g30890.1	LOC_Os03g30890	protein kinase (SD-2)	0.04	OrthoFinder output from all 47 species
LOC_Os04g56080.1	LOC_Os04g56080	protein kinase (SD-2)	0.06	OrthoFinder output from all 47 species
LOC_Os04g56090.1	LOC_Os04g56090	protein kinase (SD-2)	0.06	OrthoFinder output from all 47 species
LOC_Os06g37750.1	LOC_Os06g37750	protein kinase (SD-2)	0.04	OrthoFinder output from all 47 species
LOC_Os06g40030.1	LOC_Os06g40030	protein kinase (SD-2)	0.06	OrthoFinder output from all 47 species
LOC_Os11g03860.1	RK3, ARK3, LOC_Os11g03860	Putative receptor protein kinase ZmPK1 OS=Zea mays...	0.03	OrthoFinder output from all 47 species
LOC_Os12g03640.1	LOC_Os12g03640	protein kinase (SD-2)	0.07	OrthoFinder output from all 47 species
LOC_Os12g03650.1	LOC_Os12g03650	protein kinase (SD-2)	0.05	OrthoFinder output from all 47 species
LOC_Os12g03670.1	LOC_Os12g03670	protein kinase (SD-2)	0.06	OrthoFinder output from all 47 species
MA_10265740g0010	No alias	protein kinase (SD-2)	0.03	OrthoFinder output from all 47 species
MA_10426990g0010	No alias	Putative receptor protein kinase ZmPK1 OS=Zea mays...	0.03	OrthoFinder output from all 47 species
MA_323825g0010	No alias	Putative receptor protein kinase ZmPK1 OS=Zea mays...	0.02	OrthoFinder output from all 47 species
MA_331881g0010	No alias	Putative receptor protein kinase ZmPK1 OS=Zea mays...	0.03	OrthoFinder output from all 47 species
MA_503135g0010	No alias	G-type lectin S-receptor-like serine/threonine-protein...	0.02	OrthoFinder output from all 47 species
Pir_g15015	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Ppi_g15309	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Smo407256	No alias	G-type lectin S-receptor-like serine/threonine-protein...	0.03	OrthoFinder output from all 47 species
Solyc03g005130.3.1	Solyc03g005130	G-type lectin S-receptor-like serine/threonine-protein...	0.05	OrthoFinder output from all 47 species
Solyc03g007790.3.1	Solyc03g007790	protein kinase (SD-2)	0.04	OrthoFinder output from all 47 species
Solyc09g011330.3.1	Solyc09g011330	protein kinase (SD-2)	0.04	OrthoFinder output from all 47 species
Zm00001e002531_P001	Zm00001e002531	G-type lectin S-receptor-like serine/threonine-protein...	0.04	OrthoFinder output from all 47 species
Zm00001e028026_P001	Zm00001e028026	Putative receptor protein kinase ZmPK1 OS=Zea mays...	0.06	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004672	protein kinase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006468	protein phosphorylation	IEA	Interproscan
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008037	cell recognition	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016301	kinase activity	None	Extended
BP	GO:0016310	phosphorylation	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0048544	recognition of pollen	IEA	Interproscan
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000271	polysaccharide biosynthetic process	IEP	HCCA
MF	GO:0005102	signaling receptor binding	IEP	HCCA
CC	GO:0005576	extracellular region	IEP	HCCA
BP	GO:0005976	polysaccharide metabolic process	IEP	HCCA
BP	GO:0006073	cellular glucan metabolic process	IEP	HCCA
MF	GO:0008083	growth factor activity	IEP	HCCA
BP	GO:0008283	cell population proliferation	IEP	HCCA
BP	GO:0009250	glucan biosynthetic process	IEP	HCCA
BP	GO:0016051	carbohydrate biosynthetic process	IEP	HCCA
MF	GO:0016759	cellulose synthase activity	IEP	HCCA
MF	GO:0016760	cellulose synthase (UDP-forming) activity	IEP	HCCA
BP	GO:0030243	cellulose metabolic process	IEP	HCCA
BP	GO:0030244	cellulose biosynthetic process	IEP	HCCA
MF	GO:0030246	carbohydrate binding	IEP	HCCA
MF	GO:0030545	signaling receptor regulator activity	IEP	HCCA
MF	GO:0030546	signaling receptor activator activity	IEP	HCCA
BP	GO:0033692	cellular polysaccharide biosynthetic process	IEP	HCCA
BP	GO:0034637	cellular carbohydrate biosynthetic process	IEP	HCCA
MF	GO:0035251	UDP-glucosyltransferase activity	IEP	HCCA
BP	GO:0044042	glucan metabolic process	IEP	HCCA
BP	GO:0044264	cellular polysaccharide metabolic process	IEP	HCCA
MF	GO:0046527	glucosyltransferase activity	IEP	HCCA
MF	GO:0048018	receptor ligand activity	IEP	HCCA
BP	GO:0051273	beta-glucan metabolic process	IEP	HCCA
BP	GO:0051274	beta-glucan biosynthetic process	IEP	HCCA
MF	GO:0140677	molecular function activator activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001480	Bulb-type_lectin_dom	79	167
IPR003609	Pan_app	351	400
IPR000719	Prot_kinase_dom	524	798
IPR000858	S_locus_glycoprot_dom	251	317

External Links

No external refs found!

LOC_Os06g06960.1 (LOC_Os06g06960)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation