1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os06g06130.1

LOC_Os06g06130.1 (GLR2.1, ATGLR2.1,...)


Aliases : GLR2.1, ATGLR2.1, LOC_Os06g06130

Description : ligand-gated cation channel (GLR)


Gene families : OG0000075 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g06130.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00183760 GLR2.7,... Solute transport.channels.GLR ligand-gated cation channel 0.07 OrthoFinder output from all 47 species
Dcu_g22997 GLUR3, GLR3.4, ATGLR3.4 ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g10645 GLUR3, GLR3.4, ATGLR3.4 ligand-gated cation channel *(GLR) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0015276 ligand-gated monoatomic ion channel activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001320 Iontro_rcpt_C 827 869
IPR001828 ANF_lig-bd_rcpt 42 417
IPR001638 Solute-binding_3/MltF_N 512 826
No external refs found!