1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os06g04560.1

LOC_Os06g04560.1 (PAK, ARK3, LOC_Os06g04560)


Aliases : PAK, ARK3, LOC_Os06g04560

Description : motor protein (Kinesin-U)


Gene families : OG0001163 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001163_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g04560.1
Cluster HCCA: Cluster_170

Target Alias Description ECC score Gene Family Method Actions
AT1G12430 PAK, ARK3 armadillo repeat kinesin 3 0.04 OrthoFinder output from all 47 species
AT3G54870 CAE1, ARK1, MRH2 Armadillo/beta-catenin repeat family protein / kinesin... 0.02 OrthoFinder output from all 47 species
Adi_g025482 PAK, ARK3 Kinesin-U-type motor protein & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g11042 PAK, ARK3 Kinesin-U-type motor protein & original description: none 0.03 OrthoFinder output from all 47 species
Als_g20233 PAK, ARK3 Kinesin-U-type motor protein & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene55351.t1 PAK, ARK3,... Kinesin-U-type motor protein & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0002.g001654 ARK2 Kinesin-U-type motor protein & original description: CDS=577-3597 0.03 OrthoFinder output from all 47 species
Azfi_s0116.g046376 PAK, ARK3 Kinesin-U-type motor protein & original description: CDS=816-3860 0.01 OrthoFinder output from all 47 species
Azfi_s0435.g069902 PAK, ARK3 Kinesin-U-type motor protein & original description: CDS=659-1816 0.05 OrthoFinder output from all 47 species
Cba_g09455 PAK, ARK3 Kinesin-U-type motor protein & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.04G071600.1 PAK, ARK3,... Kinesin-U-type motor protein & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.10G026100.1 PAK, ARK3,... Kinesin-U-type motor protein & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.13G008400.1 PAK, ARK3,... Kinesin-U-type motor protein & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.18G045600.1 PAK, ARK3,... Kinesin-U-type motor protein & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.26G041100.1 PAK, ARK3,... Kinesin-U-type motor protein & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.35G006200.1 PAK, ARK3,... Kinesin-U-type motor protein & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g02378 PAK, ARK3 Kinesin-U-type motor protein & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g04969 PAK, ARK3 Kinesin-U-type motor protein & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g04905 PAK, ARK3 Kinesin-U-type motor protein & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g18936 PAK, ARK3 Kinesin-U-type motor protein & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g22009 PAK, ARK3 Kinesin-U-type motor protein & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g16485 ARK2 Kinesin-U-type motor protein & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g23101 PAK, ARK3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g23320 PAK, ARK3 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g27637 PAK, ARK3 not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01019928001 PAK, ARK3 Cytoskeleton.microtubular network.Kinesin... 0.01 OrthoFinder output from all 47 species
GSVIVT01027626001 ARK2 Cytoskeleton.microtubular network.Kinesin... 0.04 OrthoFinder output from all 47 species
Lfl_g10536 PAK, ARK3 Kinesin-U-type motor protein & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g19238 PAK, ARK3 Kinesin-U-type motor protein & original description: none 0.03 OrthoFinder output from all 47 species
Mp4g06510.1 PAK, ARK3 motor protein (Kinesin-U) 0.02 OrthoFinder output from all 47 species
Msp_g05583 PAK, ARK3 Kinesin-U-type motor protein & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g06305 PAK, ARK3 Kinesin-U-type motor protein & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g15155 PAK, ARK3 Kinesin-U-type motor protein & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g02320 ARK2 Kinesin-U-type motor protein & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g43107 ARK2 Kinesin-U-type motor protein & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0073.g017090 PAK, ARK3 Kinesin-U-type motor protein & original description: CDS=305-2806 0.04 OrthoFinder output from all 47 species
Sam_g36105 No alias Kinesin-U-type motor protein & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g091480.4.1 ARK2, Solyc01g091480 motor protein (Kinesin-U) 0.04 OrthoFinder output from all 47 species
Solyc08g079710.3.1 PAK, ARK3, Solyc08g079710 motor protein (Kinesin-U) 0.04 OrthoFinder output from all 47 species
Tin_g01208 PAK, ARK3 Kinesin-U-type motor protein & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g02888 PAK, ARK3 Kinesin-U-type motor protein & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e029950_P004 PAK, ARK3, Zm00001e029950 motor protein (Kinesin-U) 0.02 OrthoFinder output from all 47 species
Zm00001e036562_P001 PAK, ARK3, Zm00001e036562 motor protein (Kinesin-U) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003777 microtubule motor activity IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0007018 microtubule-based movement IEA Interproscan
MF GO:0008017 microtubule binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0008064 regulation of actin polymerization or depolymerization IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
BP GO:0030832 regulation of actin filament length IEP HCCA
BP GO:0030833 regulation of actin filament polymerization IEP HCCA
BP GO:0032271 regulation of protein polymerization IEP HCCA
BP GO:0032535 regulation of cellular component size IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0032956 regulation of actin cytoskeleton organization IEP HCCA
BP GO:0032970 regulation of actin filament-based process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033043 regulation of organelle organization IEP HCCA
BP GO:0043254 regulation of protein-containing complex assembly IEP HCCA
BP GO:0044087 regulation of cellular component biogenesis IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051493 regulation of cytoskeleton organization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0090066 regulation of anatomical structure size IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
BP GO:0110053 regulation of actin filament organization IEP HCCA
BP GO:1902903 regulation of supramolecular fiber organization IEP HCCA
InterPro domains Description Start Stop
IPR001752 Kinesin_motor_dom 60 400
IPR000225 Armadillo 666 703
No external refs found!