LOC_Os06g02144.1 (LOC_Os06g02144)

Aliases : LOC_Os06g02144

Description : 6-phosphogluconate dehydrogenase

Gene families : OG0000965 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000965_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os06g02144.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00061p00182310	evm_27.TU.AmTr_v1...	Carbohydrate metabolism.oxidative pentose phosphate...	0.04	OrthoFinder output from all 47 species
AT1G64190	No alias	6-phosphogluconate dehydrogenase family protein	0.04	OrthoFinder output from all 47 species
AT3G02360	No alias	6-phosphogluconate dehydrogenase family protein	0.07	OrthoFinder output from all 47 species
AT5G41670	No alias	6-phosphogluconate dehydrogenase family protein	0.02	OrthoFinder output from all 47 species
Adi_g021904	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g079436	No alias	EC_1.1 oxidoreductase acting on CH-OH group of donor &...	0.04	OrthoFinder output from all 47 species
Adi_g083974	No alias	EC_1.1 oxidoreductase acting on CH-OH group of donor &...	0.02	OrthoFinder output from all 47 species
Aev_g29969	No alias	EC_1.1 oxidoreductase acting on CH-OH group of donor &...	0.03	OrthoFinder output from all 47 species
Aob_g03203	No alias	EC_1.1 oxidoreductase acting on CH-OH group of donor &...	0.02	OrthoFinder output from all 47 species
Aob_g07903	No alias	EC_1.1 oxidoreductase acting on CH-OH group of donor &...	0.02	OrthoFinder output from all 47 species
Aop_g10211	No alias	EC_1.1 oxidoreductase acting on CH-OH group of donor &...	0.05	OrthoFinder output from all 47 species
Azfi_s0454.g071293	No alias	EC_1.1 oxidoreductase acting on CH-OH group of donor &...	0.03	OrthoFinder output from all 47 species
Cba_g51635	No alias	EC_1.1 oxidoreductase acting on CH-OH group of donor &...	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00021464.5	No alias	Carbohydrate metabolism.oxidative pentose phosphate...	0.01	OrthoFinder output from all 47 species
Dac_g16539	No alias	EC_1.1 oxidoreductase acting on CH-OH group of donor &...	0.04	OrthoFinder output from all 47 species
GSVIVT01010170001	No alias	6-phosphogluconate dehydrogenase, decarboxylating 1...	0.08	OrthoFinder output from all 47 species
GSVIVT01010171001	No alias	6-phosphogluconate dehydrogenase, decarboxylating 1...	0.06	OrthoFinder output from all 47 species
Gb_19037	No alias	6-phosphogluconate dehydrogenase	0.03	OrthoFinder output from all 47 species
Lfl_g06040	No alias	EC_1.1 oxidoreductase acting on CH-OH group of donor &...	0.02	OrthoFinder output from all 47 species
Lfl_g14222	No alias	EC_1.1 oxidoreductase acting on CH-OH group of donor &...	0.02	OrthoFinder output from all 47 species
MA_10163020g0010	No alias	6-phosphogluconate dehydrogenase	0.02	OrthoFinder output from all 47 species
MA_9068485g0010	No alias	6-phosphogluconate dehydrogenase	0.02	OrthoFinder output from all 47 species
Mp6g16320.1	No alias	6-phosphogluconate dehydrogenase	0.01	OrthoFinder output from all 47 species
Msp_g08535	No alias	EC_1.1 oxidoreductase acting on CH-OH group of donor &...	0.02	OrthoFinder output from all 47 species
Nbi_g09432	No alias	EC_1.1 oxidoreductase acting on CH-OH group of donor &...	0.03	OrthoFinder output from all 47 species
Ore_g19388	No alias	EC_1.1 oxidoreductase acting on CH-OH group of donor &...	0.02	OrthoFinder output from all 47 species
Ore_g37008	No alias	EC_1.1 oxidoreductase acting on CH-OH group of donor &...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0027.g009696	No alias	EC_1.1 oxidoreductase acting on CH-OH group of donor &...	0.02	OrthoFinder output from all 47 species
Smo168478	No alias	Carbohydrate metabolism.oxidative pentose phosphate...	0.05	OrthoFinder output from all 47 species
Smo98399	No alias	Carbohydrate metabolism.oxidative pentose phosphate...	0.02	OrthoFinder output from all 47 species
Solyc04g005160.3.1	Solyc04g005160	6-phosphogluconate dehydrogenase	0.08	OrthoFinder output from all 47 species
Solyc05g010260.4.1	Solyc05g010260	6-phosphogluconate dehydrogenase	0.03	OrthoFinder output from all 47 species
Solyc12g040570.1.1	Solyc12g040570	no description available(sp\|q9fwa3\|6pgd2_arath : 333.0)...	0.05	OrthoFinder output from all 47 species
Solyc12g056120.1.1	Solyc12g056120	6-phosphogluconate dehydrogenase	0.05	OrthoFinder output from all 47 species
Zm00001e018709_P001	Zm00001e018709	6-phosphogluconate dehydrogenase	0.05	OrthoFinder output from all 47 species
Zm00001e029820_P001	Zm00001e029820	6-phosphogluconate dehydrogenase	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004616	phosphogluconate dehydrogenase (decarboxylating) activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006091	generation of precursor metabolites and energy	None	Extended
BP	GO:0006098	pentose-phosphate shunt	IEA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006163	purine nucleotide metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006739	NADP metabolic process	None	Extended
BP	GO:0006740	NADPH regeneration	None	Extended
BP	GO:0006753	nucleoside phosphate metabolic process	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009117	nucleotide metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	None	Extended
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019362	pyridine nucleotide metabolic process	None	Extended
BP	GO:0019637	organophosphate metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0046496	nicotinamide nucleotide metabolic process	None	Extended
MF	GO:0050661	NADP binding	IEA	Interproscan
BP	GO:0051156	glucose 6-phosphate metabolic process	None	Extended
BP	GO:0055086	nucleobase-containing small molecule metabolic process	None	Extended
BP	GO:0055114	obsolete oxidation-reduction process	IEA	Interproscan
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072521	purine-containing compound metabolic process	None	Extended
BP	GO:0072524	pyridine-containing compound metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0003849	3-deoxy-7-phosphoheptulonate synthase activity	IEP	HCCA
MF	GO:0003855	3-dehydroquinate dehydratase activity	IEP	HCCA
MF	GO:0004107	chorismate synthase activity	IEP	HCCA
MF	GO:0004425	indole-3-glycerol-phosphate synthase activity	IEP	HCCA
MF	GO:0004764	shikimate 3-dehydrogenase (NADP+) activity	IEP	HCCA
BP	GO:0006082	organic acid metabolic process	IEP	HCCA
BP	GO:0006520	amino acid metabolic process	IEP	HCCA
BP	GO:0008652	amino acid biosynthetic process	IEP	HCCA
BP	GO:0009058	biosynthetic process	IEP	HCCA
BP	GO:0009072	aromatic amino acid metabolic process	IEP	HCCA
BP	GO:0009073	aromatic amino acid family biosynthetic process	IEP	HCCA
MF	GO:0009678	pyrophosphate hydrolysis-driven proton transmembrane transporter activity	IEP	HCCA
MF	GO:0015078	proton transmembrane transporter activity	IEP	HCCA
MF	GO:0015399	primary active transmembrane transporter activity	IEP	HCCA
BP	GO:0016053	organic acid biosynthetic process	IEP	HCCA
MF	GO:0016620	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	IEP	HCCA
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	IEP	HCCA
MF	GO:0016829	lyase activity	IEP	HCCA
MF	GO:0016830	carbon-carbon lyase activity	IEP	HCCA
MF	GO:0016831	carboxy-lyase activity	IEP	HCCA
MF	GO:0016835	carbon-oxygen lyase activity	IEP	HCCA
MF	GO:0016836	hydro-lyase activity	IEP	HCCA
MF	GO:0016838	carbon-oxygen lyase activity, acting on phosphates	IEP	HCCA
MF	GO:0016903	oxidoreductase activity, acting on the aldehyde or oxo group of donors	IEP	HCCA
BP	GO:0019438	aromatic compound biosynthetic process	IEP	HCCA
BP	GO:0019752	carboxylic acid metabolic process	IEP	HCCA
MF	GO:0019829	ATPase-coupled monoatomic cation transmembrane transporter activity	IEP	HCCA
MF	GO:0019842	vitamin binding	IEP	HCCA
MF	GO:0022853	active monoatomic ion transmembrane transporter activity	IEP	HCCA
MF	GO:0030170	pyridoxal phosphate binding	IEP	HCCA
CC	GO:0033178	proton-transporting two-sector ATPase complex, catalytic domain	IEP	HCCA
BP	GO:0034220	monoatomic ion transmembrane transport	IEP	HCCA
MF	GO:0042625	ATPase-coupled ion transmembrane transporter activity	IEP	HCCA
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEP	HCCA
BP	GO:0043436	oxoacid metabolic process	IEP	HCCA
BP	GO:0044249	cellular biosynthetic process	IEP	HCCA
BP	GO:0044283	small molecule biosynthetic process	IEP	HCCA
MF	GO:0044769	ATPase activity, coupled to transmembrane movement of ions, rotational mechanism	IEP	HCCA
BP	GO:0046394	carboxylic acid biosynthetic process	IEP	HCCA
MF	GO:0046961	proton-transporting ATPase activity, rotational mechanism	IEP	HCCA
MF	GO:0051287	NAD binding	IEP	HCCA
MF	GO:0070279	vitamin B6 binding	IEP	HCCA
BP	GO:0098655	monoatomic cation transmembrane transport	IEP	HCCA
BP	GO:0098660	inorganic ion transmembrane transport	IEP	HCCA
BP	GO:0098662	inorganic cation transmembrane transport	IEP	HCCA
BP	GO:1901362	organic cyclic compound biosynthetic process	IEP	HCCA
BP	GO:1901566	organonitrogen compound biosynthetic process	IEP	HCCA
BP	GO:1901576	organic substance biosynthetic process	IEP	HCCA
BP	GO:1902600	proton transmembrane transport	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006114	6PGDH_C	182	471
IPR006115	6PGDH_NADP-bd	5	177

External Links

No external refs found!

LOC_Os06g02144.1 (LOC_Os06g02144)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation