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Aliases : LOC_Os06g01670
Description : transcription factor (MYB-related). REVEILLE circadian clock factor
Gene families : OG0000435 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000435_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G01060 | LHY1, LHY | Homeodomain-like superfamily protein | 0.05 | OrthoFinder output from all 47 species | |
| AT2G46830 | CCA1 | circadian clock associated 1 | 0.03 | OrthoFinder output from all 47 species | |
| AT3G09600 | No alias | Homeodomain-like superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| AT4G01280 | No alias | Homeodomain-like superfamily protein | 0.05 | OrthoFinder output from all 47 species | |
| AT5G17300 | RVE1 | Homeodomain-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g30544 | No alias | transcription factor *(REVEILLE) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g15171 | RVE1 | circadian clock core oscillator protein *(LHY/CCA1) &... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g46995 | No alias | circadian clock factor *(REVEILLE) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene01891.t1 | Aspi01Gene01891 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene01893.t1 | Aspi01Gene01893 | transcription factor *(REVEILLE) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene16821.t1 | Aspi01Gene16821 | transcription factor *(REVEILLE) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene31231.t1 | RVE2, CIR1,... | transcription factor *(REVEILLE) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene31232.t1 | LHY1, LHY,... | circadian clock core oscillator protein *(LHY/CCA1) &... | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene31403.t1 | RVE1, Aspi01Gene31403 | transcription factor *(REVEILLE) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0001.g000277 | No alias | circadian clock factor *(REVEILLE) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0005.g008971 | RVE1 | transcription factor *(REVEILLE) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0042.g026930 | CCA1 | circadian clock core oscillator protein *(LHY/CCA1) &... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.04G087900.1 | RVE2, CIR1,... | transcription factor *(REVEILLE) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.06G032400.1 | RVE2, CIR1,... | transcription factor *(REVEILLE) & original description:... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g06441 | No alias | transcription factor *(REVEILLE) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g03554 | No alias | circadian clock factor *(REVEILLE) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g08959 | RVE1 | transcription factor *(REVEILLE) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g18608 | No alias | circadian clock factor *(REVEILLE) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g16695 | RVE2, CIR1 | transcription factor *(REVEILLE) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01027456001 | CCA1 | Multi-process regulation.circadian clock.core oscillator... | 0.06 | OrthoFinder output from all 47 species | |
| Msp_g26311 | RVE2, CIR1 | transcription factor *(REVEILLE) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g08270 | No alias | circadian clock factor *(REVEILLE) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g32617 | No alias | circadian clock factor *(REVEILLE) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g42013 | RVE2, CIR1 | transcription factor *(REVEILLE) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g12578 | No alias | transcription factor *(REVEILLE) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g51660 | No alias | circadian clock factor *(REVEILLE) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Smo166821 | No alias | Multi-process regulation.circadian clock.core oscillator... | 0.03 | OrthoFinder output from all 47 species | |
| Smo78045 | No alias | Multi-process regulation.circadian clock.evening element... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc03g098320.4.1 | RVE1, Solyc03g098320 | transcription factor (MYB-related) | 0.06 | OrthoFinder output from all 47 species | |
| Solyc10g005080.3.1 | LHY1, LHY, Solyc10g005080 | transcription factor (MYB-related). circadian clock core... | 0.06 | OrthoFinder output from all 47 species | |
| Solyc10g084370.3.1 | Solyc10g084370 | transcription factor (MYB-related). REVEILLE circadian... | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g46612 | No alias | circadian clock factor *(REVEILLE) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e006465_P001 | Zm00001e006465 | transcription factor (MYB-related) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e013333_P002 | RVE2, CIR1,... | transcription factor (MYB-related) | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e016853_P001 | Zm00001e016853 | transcription factor (MYB-related) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e021724_P005 | LHY1, LHY, Zm00001e021724 | transcription factor (MYB-related). circadian clock core... | 0.1 | OrthoFinder output from all 47 species | |
| Zm00001e023232_P002 | Zm00001e023232 | transcription factor (MYB-related). REVEILLE circadian... | 0.11 | OrthoFinder output from all 47 species | |
| Zm00001e037757_P001 | Zm00001e037757 | transcription factor (MYB-related). REVEILLE circadian... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e040217_P001 | LHY1, LHY, Zm00001e040217 | circadian clock core oscillator protein (LHY|CCA1) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| MF | GO:0015291 | secondary active transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015297 | antiporter activity | IEP | HCCA |
| MF | GO:0022804 | active transmembrane transporter activity | IEP | HCCA |
| MF | GO:0042910 | xenobiotic transmembrane transporter activity | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001005 | SANT/Myb | 40 | 84 |
| No external refs found! |