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  5. LOC_Os05g49420.1

LOC_Os05g49420.1 (GBF3, LOC_Os05g49420)


Aliases : GBF3, LOC_Os05g49420

Description : transcription factor (bZIP)


Gene families : OG0000424 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000424_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g49420.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00158p00056990 GBF3,... RNA biosynthesis.transcriptional activation.bZIP... 0.04 OrthoFinder output from all 47 species
AT2G46270 GBF3 G-box binding factor 3 0.03 OrthoFinder output from all 47 species
Aob_g03322 bZIP16, AtbZIP16 bZIP class-G transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g06008 bZIP16, AtbZIP16 bZIP class-G transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene31985.t2 bZIP16,... bZIP class-G transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20426 bZIP68, AtbZIP68 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g44264 bZIP16, AtbZIP16 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000863.38 No alias RNA biosynthesis.transcriptional activation.bZIP... 0.02 OrthoFinder output from all 47 species
Ehy_g22286 bZIP68, AtbZIP68 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01019009001 GBF1 RNA biosynthesis.transcriptional activation.bZIP... 0.02 OrthoFinder output from all 47 species
GSVIVT01019481001 GBF3 RNA biosynthesis.transcriptional activation.bZIP... 0.04 OrthoFinder output from all 47 species
GSVIVT01027040001 GBF3 RNA biosynthesis.transcriptional activation.bZIP... 0.14 OrthoFinder output from all 47 species
LOC_Os02g03580.1 bZIP68,... transcription factor (bZIP) 0.07 OrthoFinder output from all 47 species
Ppi_g15169 bZIP68, AtbZIP68 bZIP class-G transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0036.g011550 bZIP16, AtbZIP16 bZIP class-G transcription factor & original... 0.02 OrthoFinder output from all 47 species
Zm00001e032476_P001 GBF3, Zm00001e032476 transcription factor (bZIP) 0.03 OrthoFinder output from all 47 species
Zm00001e038616_P003 bZIP16,... transcription factor (bZIP) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
InterPro domains Description Start Stop
IPR012900 MFMR 1 93
IPR004827 bZIP 245 307
No external refs found!