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  5. LOC_Os05g48900.1

LOC_Os05g48900.1 (FLA13, LOC_Os05g48900)


Aliases : FLA13, LOC_Os05g48900

Description : fasciclin-type arabinogalactan protein


Gene families : OG0000997 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000997_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g48900.1
Cluster HCCA: Cluster_171

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00166710 ATFLA11, FLA11,... Cell wall.cell wall proteins.hydroxyproline-rich... 0.07 OrthoFinder output from all 47 species
AT1G03870 FLA9 FASCICLIN-like arabinoogalactan 9 0.08 OrthoFinder output from all 47 species
AT2G04780 FLA7 FASCICLIN-like arabinoogalactan 7 0.1 OrthoFinder output from all 47 species
AT5G03170 ATFLA11, FLA11 FASCICLIN-like arabinogalactan-protein 11 0.14 OrthoFinder output from all 47 species
AT5G44130 FLA13 FASCICLIN-like arabinogalactan protein 13 precursor 0.04 OrthoFinder output from all 47 species
AT5G60490 FLA12 FASCICLIN-like arabinogalactan-protein 12 0.16 OrthoFinder output from all 47 species
Adi_g092723 SOS5 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Adi_g094376 FLA9 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Adi_g123114 SOS5 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g07898 FLA7 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g12078 ATFLA11, FLA11 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g12402 FLA7 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g19811 FLA7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05479 ATFLA11, FLA11 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07784 FLA7 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g49885 FLA7 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g52617 FLA12 Fasciclin-type arabinogalactan protein & original... 0.02 OrthoFinder output from all 47 species
Aob_g30185 SOS5 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g01653 SOS5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08381 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g13783 FLA7 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g41611 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene56705.t1 FLA7, Aspi01Gene56705 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene70726.t1 FLA12, Aspi01Gene70726 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0014.g013577 SOS5 not classified & original description: CDS=1-996 0.04 OrthoFinder output from all 47 species
Cba_g01638 SOS5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g03090 FLA12 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g11000 FLA7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.07G043100.1 SOS5, Ceric.07G043100 not classified & original description: pacid=50627558... 0.02 OrthoFinder output from all 47 species
Ceric.10G036000.1 Ceric.10G036000 not classified & original description: pacid=50611973... 0.03 OrthoFinder output from all 47 species
Ceric.12G007400.1 ATFLA11, FLA11,... not classified & original description: pacid=50600882... 0.08 OrthoFinder output from all 47 species
Ceric.19G073100.1 Ceric.19G073100 not classified & original description: pacid=50576358... 0.05 OrthoFinder output from all 47 species
Ceric.28G026900.1 ATFLA11, FLA11,... not classified & original description: pacid=50569481... 0.03 OrthoFinder output from all 47 species
Ceric.28G027000.1 SOS5, Ceric.28G027000 not classified & original description: pacid=50571069... 0.07 OrthoFinder output from all 47 species
Ceric.28G027100.1 ATFLA11, FLA11,... not classified & original description: pacid=50570256... 0.05 OrthoFinder output from all 47 species
Ceric.28G027400.1 FLA7, Ceric.28G027400 not classified & original description: pacid=50570668... 0.05 OrthoFinder output from all 47 species
Ceric.38G066200.1 SOS5, Ceric.38G066200 not classified & original description: pacid=50580301... 0.07 OrthoFinder output from all 47 species
Ceric.39G038300.1 ATFLA11, FLA11,... not classified & original description: pacid=50582633... 0.05 OrthoFinder output from all 47 species
Dac_g01372 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g07272 FLA7 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dac_g09990 FLA7 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g10854 SOS5 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g16387 FLA7 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g17944 FLA13 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g17954 FLA9 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01025167001 ATFLA11, FLA11 Cell wall.cell wall proteins.hydroxyproline-rich... 0.07 OrthoFinder output from all 47 species
GSVIVT01025660001 ATFLA11, FLA11 Cell wall.cell wall proteins.hydroxyproline-rich... 0.14 OrthoFinder output from all 47 species
GSVIVT01025662001 ATFLA11, FLA11 Cell wall.cell wall proteins.hydroxyproline-rich... 0.07 OrthoFinder output from all 47 species
GSVIVT01025663001 ATFLA11, FLA11 Cell wall.cell wall proteins.hydroxyproline-rich... 0.02 OrthoFinder output from all 47 species
GSVIVT01025665001 ATFLA11, FLA11 Cell wall.cell wall proteins.hydroxyproline-rich... 0.04 OrthoFinder output from all 47 species
GSVIVT01025669001 ATFLA11, FLA11 Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 OrthoFinder output from all 47 species
GSVIVT01025671001 ATFLA11, FLA11 Cell wall.cell wall proteins.hydroxyproline-rich... 0.11 OrthoFinder output from all 47 species
Gb_01998 ATFLA11, FLA11 fasciclin-type arabinogalactan protein 0.09 OrthoFinder output from all 47 species
LOC_Os02g20540.1 FLA6, LOC_Os02g20540 fasciclin-type arabinogalactan protein 0.08 OrthoFinder output from all 47 species
LOC_Os02g20560.1 FLA9, LOC_Os02g20560 fasciclin-type arabinogalactan protein 0.08 OrthoFinder output from all 47 species
LOC_Os04g39590.1 FLA7, LOC_Os04g39590 fasciclin-type arabinogalactan protein 0.05 OrthoFinder output from all 47 species
LOC_Os04g39600.1 FLA7, LOC_Os04g39600 fasciclin-type arabinogalactan protein 0.05 OrthoFinder output from all 47 species
Len_g00384 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g02171 ATFLA11, FLA11 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Len_g13731 FLA7 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Len_g17277 FLA7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g21109 FLA7 not classified & original description: none 0.07 OrthoFinder output from all 47 species
MA_5195g0010 FLA12 Fasciclin-like arabinogalactan protein 12 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Msp_g05705 FLA7 Fasciclin-type arabinogalactan protein & original... 0.04 OrthoFinder output from all 47 species
Msp_g09506 FLA7 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g23143 FLA7 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g05640 No alias Fasciclin-type arabinogalactan protein & original... 0.04 OrthoFinder output from all 47 species
Nbi_g10980 FLA7 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g13961 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Pir_g23857 SOS5 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g48472 ATFLA11, FLA11 Fasciclin-type arabinogalactan protein & original... 0.02 OrthoFinder output from all 47 species
Pir_g53993 FLA7 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g20307 SOS5 regulatory factor SOS5 of SOS *(Salt Overly Sensitive)... 0.06 OrthoFinder output from all 47 species
Ppi_g00648 FLA7 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g10779 FLA7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g24427 FLA7 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g26588 SOS5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g60593 SOS5 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0033.g011051 FLA10 not classified & original description: CDS=1-792 0.05 OrthoFinder output from all 47 species
Sam_g05188 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc06g075220.1.1 ATFLA11, FLA11,... fasciclin-type arabinogalactan protein 0.07 OrthoFinder output from all 47 species
Solyc07g053540.1.1 FLA9, Solyc07g053540 fasciclin-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
Solyc09g007650.3.1 ATFLA11, FLA11,... fasciclin-type arabinogalactan protein 0.05 OrthoFinder output from all 47 species
Solyc09g007660.1.1 FLA12, Solyc09g007660 fasciclin-type arabinogalactan protein 0.07 OrthoFinder output from all 47 species
Solyc11g069250.2.1 ATFLA11, FLA11,... fasciclin-type arabinogalactan protein 0.07 OrthoFinder output from all 47 species
Spa_g05505 FLA13 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g07360 FLA7 not classified & original description: none 0.1 OrthoFinder output from all 47 species
Spa_g07630 FLA7 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g09707 SOS5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g09857 SOS5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g21452 SOS5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g24482 FLA7 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Spa_g49660 SOS5 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g03821 FLA7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g12335 SOS5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13713 FLA7 not classified & original description: none 0.09 OrthoFinder output from all 47 species
Tin_g19995 FLA7 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e010053_P001 FLA7, Zm00001e010053 fasciclin-type arabinogalactan protein 0.11 OrthoFinder output from all 47 species
Zm00001e016840_P001 ATFLA11, FLA11,... fasciclin-type arabinogalactan protein 0.18 OrthoFinder output from all 47 species
Zm00001e020209_P002 ATFLA11, FLA11,... fasciclin-type arabinogalactan protein 0.16 OrthoFinder output from all 47 species
Zm00001e024362_P001 FLA7, Zm00001e024362 fasciclin-type arabinogalactan protein 0.05 OrthoFinder output from all 47 species
Zm00001e026526_P001 FLA9, Zm00001e026526 fasciclin-type arabinogalactan protein 0.13 OrthoFinder output from all 47 species
Zm00001e032425_P001 FLA6, Zm00001e032425 Fasciclin-like arabinogalactan protein 6 OS=Arabidopsis... 0.17 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0006026 aminoglycan catabolic process IEP HCCA
BP GO:0006030 chitin metabolic process IEP HCCA
BP GO:0006032 chitin catabolic process IEP HCCA
BP GO:0006040 amino sugar metabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP HCCA
MF GO:0015020 glucuronosyltransferase activity IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0046348 amino sugar catabolic process IEP HCCA
CC GO:0046658 obsolete anchored component of plasma membrane IEP HCCA
BP GO:1901071 glucosamine-containing compound metabolic process IEP HCCA
BP GO:1901072 glucosamine-containing compound catabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000782 FAS1_domain 62 192
No external refs found!