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  5. LOC_Os05g48220.1

LOC_Os05g48220.1 (LOC_Os05g48220)


Aliases : LOC_Os05g48220

Description : component RPL35a of LSU proteome component


Gene families : OG0000881 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000881_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: LOC_Os05g48220.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00195890 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
Als_g13844 No alias component *(eL33) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Aob_g20722 No alias component *(eL33) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Aop_g28942 No alias component *(eL33) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Cre10.g459250 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.01 OrthoFinder output from all 47 species
Pir_g53979 No alias component *(eL33) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Pp3c11_9630V3.1 Pp3c11_9630 Ribosomal protein L35Ae family protein 0.01 OrthoFinder output from all 47 species
Pp3c3_3480V3.1 Pp3c3_3480 Ribosomal protein L35Ae family protein 0.02 OrthoFinder output from all 47 species
Sam_g42222 No alias component *(eL33) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 47 species
Solyc05g052800.3.1 Solyc05g052800 component RPL35a of LSU proteome component 0.02 OrthoFinder output from all 47 species
Solyc05g052810.4.1 Solyc05g052810 component RPL35a of LSU proteome component 0.02 OrthoFinder output from all 47 species
Zm00001e009729_P001 Zm00001e009729 component RPL35a of LSU proteome component 0.02 OrthoFinder output from all 47 species
Zm00001e023741_P003 Zm00001e023741 component RPL35a of LSU proteome component 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR001780 Ribosomal_L35A 11 105
No external refs found!