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  5. LOC_Os05g45070.1

LOC_Os05g45070.1 (LOC_Os05g45070)


Aliases : LOC_Os05g45070

Description : no hits & (original description: none)


Gene families : OG0000463 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000463_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g45070.1
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
AT3G54200 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.03 OrthoFinder output from all 47 species
Adi_g110824 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g01531 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07895 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g23176 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g36518 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g04111 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene08819.t1 Aspi01Gene08819 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene17497.t1 Aspi01Gene17497 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene61401.t1 Aspi01Gene61401 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.03G013700.1 Ceric.03G013700 not classified & original description: pacid=50571296... 0.03 OrthoFinder output from all 47 species
Ceric.05G006900.1 Ceric.05G006900 not classified & original description: pacid=50578077... 0.02 OrthoFinder output from all 47 species
Dac_g12278 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g48973 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g00605 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01029849001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_12838 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Gb_17477 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g26763 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g27248 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g15296 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g31123 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001432 No alias not classified & original description: CDS=1-912 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0076.g017450 No alias not classified & original description: CDS=1213-1908 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0106.g020255 No alias not classified & original description: CDS=1-648 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0116.g021071 No alias not classified & original description: CDS=1-585 0.02 OrthoFinder output from all 47 species
Sam_g23123 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g04647 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e019888_P001 Zm00001e019888 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005672 transcription factor TFIIA complex IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
InterPro domains Description Start Stop
IPR004864 LEA_2 120 219
No external refs found!