LOC_Os05g39760.1 (LOC_Os05g39760)


Aliases : LOC_Os05g39760

Description : TOM endomembrane trafficking associated protein


Gene families : OG0000393 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000393_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g39760.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00118270 evm_27.TU.AmTr_v1... Vesicle trafficking.endomembrane trafficking.protein... 0.03 OrthoFinder output from all 47 species
AMTR_s00067p00032430 evm_27.TU.AmTr_v1... Vesicle trafficking.endomembrane trafficking.protein... 0.02 OrthoFinder output from all 47 species
AMTR_s00130p00102230 evm_27.TU.AmTr_v1... Vesicle trafficking.endomembrane trafficking.protein... 0.02 OrthoFinder output from all 47 species
AT1G21380 No alias Target of Myb protein 1 0.02 OrthoFinder output from all 47 species
AT1G76970 No alias Target of Myb protein 1 0.04 OrthoFinder output from all 47 species
AT3G08790 No alias ENTH/VHS/GAT family protein 0.03 OrthoFinder output from all 47 species
Adi_g060027 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g20194 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g03896 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g05497 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g32447 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g17486 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g01215 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g12622 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.1Z062500.1 Ceric.1Z062500 ubiquitin adaptor protein *(TOL) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.26G053600.1 Ceric.26G053600 ubiquitin adaptor protein *(TOL) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.35G060000.1 Ceric.35G060000 ubiquitin adaptor protein *(TOL) & original description:... 0.06 OrthoFinder output from all 47 species
Dcu_g03722 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g05692 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g06382 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g07022 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g08332 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g10574 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01022425001 No alias Vesicle trafficking.endomembrane trafficking.protein... 0.02 OrthoFinder output from all 47 species
Gb_06800 No alias TOM endomembrane trafficking associated protein 0.03 OrthoFinder output from all 47 species
LOC_Os05g27320.2 LOC_Os05g27320 TOM endomembrane trafficking associated protein 0.02 OrthoFinder output from all 47 species
Len_g03732 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g08083 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.04 OrthoFinder output from all 47 species
Len_g08802 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g33770 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g02099 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.03 OrthoFinder output from all 47 species
MA_10433759g0010 No alias TOM1-like protein 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_12709g0010 No alias TOM endomembrane trafficking associated protein 0.02 OrthoFinder output from all 47 species
Msp_g06204 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g07938 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g45551 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g05386 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g03446 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g15383 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g01965 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g06559 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g000824 No alias ubiquitin adaptor protein *(TOL) & original description:... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007586 No alias ubiquitin adaptor protein *(TOL) & original description:... 0.04 OrthoFinder output from all 47 species
Sam_g07312 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g07313 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g08645 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g15243 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.03 OrthoFinder output from all 47 species
Smo176673 No alias Vesicle trafficking.endomembrane trafficking.protein... 0.03 OrthoFinder output from all 47 species
Smo67275 No alias Vesicle trafficking.endomembrane trafficking.protein... 0.02 OrthoFinder output from all 47 species
Smo82329 No alias Vesicle trafficking.endomembrane trafficking.protein... 0.02 OrthoFinder output from all 47 species
Smo89807 No alias Vesicle trafficking.endomembrane trafficking.protein... 0.03 OrthoFinder output from all 47 species
Solyc03g097070.3.1 Solyc03g097070 TOM endomembrane trafficking associated protein 0.07 OrthoFinder output from all 47 species
Solyc04g063280.3.1 Solyc04g063280 TOM endomembrane trafficking associated protein 0.05 OrthoFinder output from all 47 species
Solyc08g068370.3.1 Solyc08g068370 TOM endomembrane trafficking associated protein 0.02 OrthoFinder output from all 47 species
Solyc09g025240.3.1 Solyc09g025240 TOM endomembrane trafficking associated protein 0.03 OrthoFinder output from all 47 species
Solyc11g005460.2.1 Solyc11g005460 TOM endomembrane trafficking associated protein 0.03 OrthoFinder output from all 47 species
Spa_g05647 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g16950 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g25340 No alias ubiquiTin adaptor protein *(TOL) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e021369_P002 Zm00001e021369 TOM endomembrane trafficking associated protein 0.02 OrthoFinder output from all 47 species
Zm00001e026110_P002 Zm00001e026110 TOM endomembrane trafficking associated protein 0.02 OrthoFinder output from all 47 species
Zm00001e031902_P001 Zm00001e031902 TOM endomembrane trafficking associated protein 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP HCCA
MF GO:0003993 acid phosphatase activity IEP HCCA
MF GO:0004602 glutathione peroxidase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0040008 regulation of growth IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0045927 positive regulation of growth IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR002014 VHS_dom 16 126
IPR004152 GAT_dom 204 277
No external refs found!