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  5. LOC_Os05g39590.3

LOC_Os05g39590.3 (LOC_Os05g39590)


Aliases : LOC_Os05g39590

Description : Dehydration-responsive element-binding protein 2D OS=Oryza sativa subsp. japonica (sp|q65wx1|dre2d_orysj : 253.0)


Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g39590.3

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00069p00140780 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
AMTR_s00150p00091360 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.06 OrthoFinder output from all 47 species
AT1G06160 ORA59 octadecanoid-responsive Arabidopsis AP2/ERF 59 0.03 OrthoFinder output from all 47 species
AT1G50640 ATERF3, ERF3 ethylene responsive element binding factor 3 0.04 OrthoFinder output from all 47 species
AT2G31230 ATERF15, ERF15 ethylene-responsive element binding factor 15 0.03 OrthoFinder output from all 47 species
Aev_g16587 WIN1, SHN1 cutin and suberin biosynthesis transcription factor... 0.02 OrthoFinder output from all 47 species
Aev_g17007 TINY2 subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aev_g20161 TINY2 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aev_g21810 DEAR1, CEJ1, ATERF#011 subgroup ERF-II transcription factor *(ERF19/20) &... 0.04 OrthoFinder output from all 47 species
Aev_g31166 No alias subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aev_g48888 TINY2 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ala_g19433 No alias subgroup ERF-V transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g25633 DREB26 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g36009 DEAR3 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.03 OrthoFinder output from all 47 species
Als_g46307 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aob_g19242 RAP2.11 transcription factor *(ERN1) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g22889 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Aop_g21431 No alias subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene05425.t1 ORA47, Aspi01Gene05425 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene15146.t1 Aspi01Gene15146 subgroup ERF-V transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene17089.t1 Aspi01Gene17089 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene27034.t1 TINY2, Aspi01Gene27034 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene32071.t1 Aspi01Gene32071 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene32072.t1 Aspi01Gene32072 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene34446.t1 Aspi01Gene34446 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene35032.t1 Rap2.6L, Aspi01Gene35032 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene58508.t1 Aspi01Gene58508 subgroup ERF-III transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene61391.t1 DEAR3, Aspi01Gene61391 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene65343.t1 Aspi01Gene65343 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0182.g056415 DEAR1, CEJ1, ATERF#011 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.04 OrthoFinder output from all 47 species
Azfi_s0275.g061420 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.04 OrthoFinder output from all 47 species
Cba_g03083 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Cba_g05027 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Cba_g10614 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Cba_g22261 DEAR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.05G034300.1 RAP2.1, Ceric.05G034300 not classified & original description: pacid=50578765... 0.04 OrthoFinder output from all 47 species
Ceric.05G076100.1 ATERF12, ERF12,... subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ceric.13G080300.1 Ceric.13G080300 subgroup ERF-V transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ceric.24G043300.1 Ceric.24G043300 not classified & original description: pacid=50629223... 0.04 OrthoFinder output from all 47 species
Ceric.27G015600.1 DEAR1, CEJ1,... not classified & original description: pacid=50605746... 0.03 OrthoFinder output from all 47 species
Dac_g06247 ERF72, EBP, ATEBP, RAP2.3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g38876 DEAR1, CEJ1, ATERF#011 subgroup ERF-II transcription factor *(ERF19/20) &... 0.03 OrthoFinder output from all 47 species
Dcu_g00708 ERF7, ATERF7, ATERF-7 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dcu_g05290 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07677 RAP2.2 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Dcu_g10630 DEAR1, CEJ1, ATERF#011 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.02 OrthoFinder output from all 47 species
Dcu_g25201 ATERF-9, ERF9, ATERF9 subgroup ERF-VIII transcription factor & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01002262001 RAP2.4 RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
GSVIVT01013924001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 OrthoFinder output from all 47 species
GSVIVT01017315001 WIN1, SHN1 Cell wall.cutin and suberin.biosynthesis... 0.04 OrthoFinder output from all 47 species
GSVIVT01021098001 ATERF4, RAP2.5,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
GSVIVT01028313001 ERF14, ATERF14 RNA biosynthesis.transcriptional activation.AP2/ERF... 0.05 OrthoFinder output from all 47 species
Gb_01211 No alias transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Gb_03782 ERF-1, ATERF-1 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Gb_03783 ERF-1, ATERF-1 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Gb_06408 No alias transcription factor (DREB) 0.05 OrthoFinder output from all 47 species
Gb_11807 No alias transcription factor (DREB) 0.04 OrthoFinder output from all 47 species
Gb_19221 DEAR3 Ethylene-responsive transcription factor ERF008... 0.02 OrthoFinder output from all 47 species
Gb_24328 HRD transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Gb_26738 DREB26 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Gb_26856 No alias transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Gb_26858 HRD transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Gb_36618 DREB26 Ethylene-responsive transcription factor ERF012... 0.03 OrthoFinder output from all 47 species
Gb_36619 DEAR3 Ethylene-responsive transcription factor ERF008... 0.02 OrthoFinder output from all 47 species
Gb_39497 ERF7, ATERF7, ATERF-7 transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
LOC_Os04g52090.1 ATERF-9, ERF9,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
LOC_Os05g41760.1 ATERF12, ERF12,... transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
Len_g02180 No alias subgroup ERF-III transcription factor & original... 0.04 OrthoFinder output from all 47 species
MA_10020434g0010 No alias Ethylene-responsive transcription factor ERF013... 0.04 OrthoFinder output from all 47 species
MA_10266433g0010 ERF-1, ATERF-1 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
MA_10430769g0010 tny transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
MA_10432800g0010 No alias transcription factor (ERF) 0.05 OrthoFinder output from all 47 species
MA_108992g0010 ORA47 transcription factor (DREB) 0.04 OrthoFinder output from all 47 species
MA_16778g0010 DREB2A, DREB2 transcription factor (DREB) 0.04 OrthoFinder output from all 47 species
MA_179692g0020 ERF-1, ATERF-1 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
MA_30120g0010 DRN-LIKE, ESR2,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
MA_4182g0010 Rap2.6L no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_4929994g0010 ERF2, ATERF2, ATERF-2 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
MA_500288g0010 ABI4, SAN5,... transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
MA_5280013g0010 ORA47 transcription factor (DREB) 0.04 OrthoFinder output from all 47 species
MA_6677438g0010 ERF-1, ATERF-1 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
MA_7960347g0010 TMO3, CRF2 transcription factor (ERF) 0.11 OrthoFinder output from all 47 species
MA_83118g0010 No alias transcription factor (DREB) 0.04 OrthoFinder output from all 47 species
MA_94228g0010 No alias transcription factor (ERF). SHN-type cutin and suberin... 0.06 OrthoFinder output from all 47 species
Mp6g04880.1 DREB26 Ethylene-responsive transcription factor ERF008... 0.02 OrthoFinder output from all 47 species
Mp6g08690.1 TINY2 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Mp6g18650.1 RAP2.11 transcription factor (ERF). transcription factor (ERN1) 0.03 OrthoFinder output from all 47 species
Mp7g13760.1 RAP2.4 transcription factor (DREB) 0.05 OrthoFinder output from all 47 species
Msp_g35934 RAP2.9, DEAR5 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g04002 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ore_g07819 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ore_g17161 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ore_g27584 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ore_g36978 TINY2 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ore_g40972 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ore_g44514 No alias cutin and suberin biosynthesis transcription factor... 0.03 OrthoFinder output from all 47 species
Pir_g06183 No alias subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pir_g47053 RRTF1 subgroup ERF-X transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g02451 HRE2 subgroup ERF-VI transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g26646 RAP2.2 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Pp3c10_17870V3.1 Pp3c10_17870 Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
Ppi_g11128 HRE2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13575 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g22142 tny subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0031.g010633 No alias not classified & original description: CDS=1-1278 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0200.g025602 No alias subgroup ERF-V transcription factor & original... 0.02 OrthoFinder output from all 47 species
Solyc03g118190.4.1 Solyc03g118190 transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
Solyc06g068830.2.1 Solyc06g068830 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Solyc10g006130.1.1 ATERF3, ERF3,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Solyc10g050960.3.1 RRTF1, Solyc10g050960 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Solyc11g012980.1.1 Solyc11g012980 Ethylene-responsive transcription factor ERF012... 0.03 OrthoFinder output from all 47 species
Solyc11g042560.1.1 Solyc11g042560 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Tin_g08575 ORA47 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.03 OrthoFinder output from all 47 species
Tin_g23712 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g30387 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Zm00001e015314_P001 ERF5, ATERF-5,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Zm00001e015430_P001 CBF4, DREB1D,... Dehydration-responsive element-binding protein 1G... 0.02 OrthoFinder output from all 47 species
Zm00001e016421_P001 CRF4, Zm00001e016421 transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
Zm00001e021579_P001 ERF7, ATERF7,... Pathogenesis-related genes transcriptional activator... 0.02 OrthoFinder output from all 47 species
Zm00001e023759_P001 Zm00001e023759 Ethylene-responsive transcription factor ERF017... 0.03 OrthoFinder output from all 47 species
Zm00001e035837_P001 ERF72, EBP,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Zm00001e041532_P001 Zm00001e041532 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 67 114
No external refs found!