LOC_Os05g37120.1 (LOC_Os05g37120)

Aliases : LOC_Os05g37120

Description : Protein transport protein Sec24-like At3g07100 OS=Arabidopsis thaliana (sp|q9sfu0|sc24a_arath : 87.0)

Gene families : OG0003840 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003840_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os05g37120.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00031p00165880	evm_27.TU.AmTr_v1...	Protein transport protein Sec24-like At3g07100...	0.03	OrthoFinder output from all 47 species
Adi_g007020	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g23056	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g07811	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
MA_19933g0030	No alias	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Pp3c26_15780V3.1	Pp3c26_15780	sec23/sec24 transport family protein	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	IEA	Interproscan
BP	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IEA	Interproscan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0016192	vesicle-mediated transport	None	Extended
CC	GO:0030117	membrane coat	None	Extended
CC	GO:0030120	vesicle coat	None	Extended
CC	GO:0030127	COPII vesicle coat	IEA	Interproscan
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0048193	Golgi vesicle transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006486	protein glycosylation	IEP	HCCA
MF	GO:0008417	fucosyltransferase activity	IEP	HCCA
CC	GO:0016020	membrane	IEP	HCCA
MF	GO:0016758	hexosyltransferase activity	IEP	HCCA
BP	GO:0043413	macromolecule glycosylation	IEP	HCCA
MF	GO:0051536	iron-sulfur cluster binding	IEP	HCCA
MF	GO:0051540	metal cluster binding	IEP	HCCA
BP	GO:0070085	glycosylation	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006900	Sec23/24_helical_dom	501	608
IPR006896	Sec23/24_trunk_dom	123	375

External Links

No external refs found!