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  5. LOC_Os05g35970.1

LOC_Os05g35970.1 (LOC_Os05g35970)


Aliases : LOC_Os05g35970

Description : no hits & (original description: none)


Gene families : OG0008910 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008910_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g35970.1
Cluster HCCA: Cluster_161

Target Alias Description ECC score Gene Family Method Actions
AT1G44414 No alias unknown protein; Has 29 Blast hits to 29 proteins in 12... 0.05 OrthoFinder output from all 47 species
Ceric.03G032700.1 Ceric.03G032700 not classified & original description: pacid=50571802... 0.03 OrthoFinder output from all 47 species
Ceric.31G008200.1 Ceric.31G008200 not classified & original description: pacid=50574964... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0068.g016354 No alias not classified & original description: CDS=1-348 0.02 OrthoFinder output from all 47 species
Solyc06g060300.1.1 Solyc06g060300 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Tin_g14497 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR031493 Zinc_ribbon_15 23 109
No external refs found!