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  5. LOC_Os05g35160.1

LOC_Os05g35160.1 (LOC_Os05g35160)


Aliases : LOC_Os05g35160

Description : ECA1/2 clathrin coated vesicle adaptor protein


Gene families : OG0000273 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000273_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g35160.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00161520 evm_27.TU.AmTr_v1... Vesicle trafficking.clathrin coated vesicle (CCV)... 0.01 OrthoFinder output from all 47 species
AMTR_s00028p00200060 evm_27.TU.AmTr_v1... Vesicle trafficking.clathrin coated vesicle (CCV)... 0.07 OrthoFinder output from all 47 species
AMTR_s00071p00051500 evm_27.TU.AmTr_v1... Vesicle trafficking.clathrin coated vesicle (CCV)... 0.09 OrthoFinder output from all 47 species
AT1G03050 No alias ENTH/ANTH/VHS superfamily protein 0.04 OrthoFinder output from all 47 species
AT4G02650 No alias ENTH/ANTH/VHS superfamily protein 0.05 OrthoFinder output from all 47 species
Adi_g055261 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g14787 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g03939 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g11800 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g06797 No alias accessory protein *(PlCALM3) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01015603001 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.03 OrthoFinder output from all 47 species
GSVIVT01029746001 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.05 OrthoFinder output from all 47 species
GSVIVT01030504001 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.03 OrthoFinder output from all 47 species
LOC_Os02g07900.1 LOC_Os02g07900 ECA1/2 clathrin coated vesicle adaptor protein 0.05 OrthoFinder output from all 47 species
Nbi_g09369 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g26728 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001850 No alias not classified & original description: CDS=1-1887 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0133.g022248 No alias not classified & original description: CDS=1-1188 0.02 OrthoFinder output from all 47 species
Sam_g07860 No alias accessory protein *(PlCALM3) & original description: none 0.02 OrthoFinder output from all 47 species
Smo440070 No alias Putative clathrin assembly protein At4g02650... 0.03 OrthoFinder output from all 47 species
Solyc01g104870.3.1 Solyc01g104870 ECA1/2 clathrin coated vesicle adaptor protein 0.04 OrthoFinder output from all 47 species
Solyc02g043810.4.1 Solyc02g043810 ECA1/2 clathrin coated vesicle adaptor protein 0.04 OrthoFinder output from all 47 species
Solyc07g008060.1.1 Solyc07g008060 component CAP1/ECA4 of TPLATE AP-2 co-adaptor complex 0.03 OrthoFinder output from all 47 species
Solyc11g044860.3.1 Solyc11g044860 ECA1/2 clathrin coated vesicle adaptor protein 0.03 OrthoFinder output from all 47 species
Solyc12g006000.1.1 Solyc12g006000 clathrin assembly protein (AP180) 0.04 OrthoFinder output from all 47 species
Solyc12g010530.3.1 Solyc12g010530 Putative clathrin assembly protein At5g35200... 0.02 OrthoFinder output from all 47 species
Spa_g18247 No alias accessory protein *(PlCALM3) & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e013776_P003 Zm00001e013776 ECA1/2 clathrin coated vesicle adaptor protein 0.03 OrthoFinder output from all 47 species
Zm00001e027027_P002 Zm00001e027027 ECA1/2 clathrin coated vesicle adaptor protein 0.13 OrthoFinder output from all 47 species
Zm00001e030401_P001 Zm00001e030401 ECA1/2 clathrin coated vesicle adaptor protein 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005543 phospholipid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR011417 ANTH_dom 33 337
No external refs found!