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  5. LOC_Os05g33200.1

LOC_Os05g33200.1 (LOC_Os05g33200)


Aliases : LOC_Os05g33200

Description : Endo-1,3;1,4-beta-D-glucanase OS=Zea mays (sp|q9zt66|e134_maize : 206.0)


Gene families : OG0000500 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000500_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g33200.1
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
Adi_g082041 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g37899 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g65909 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.14G043700.1 Ceric.14G043700 not classified & original description: pacid=50633865... 0.07 OrthoFinder output from all 47 species
GSVIVT01011091001 No alias Endo-1,3;1,4-beta-D-glucanase OS=Zea mays 0.02 OrthoFinder output from all 47 species
GSVIVT01017877001 No alias Endo-1,3;1,4-beta-D-glucanase OS=Zea mays 0.03 OrthoFinder output from all 47 species
LOC_Os05g33110.1 LOC_Os05g33110 Endo-1,3;1,4-beta-D-glucanase OS=Zea mays... 0.07 OrthoFinder output from all 47 species
LOC_Os05g33190.1 LOC_Os05g33190 Endo-1,3;1,4-beta-D-glucanase OS=Zea mays... 0.02 OrthoFinder output from all 47 species
LOC_Os08g14000.1 LOC_Os08g14000 Endo-1,3;1,4-beta-D-glucanase OS=Zea mays... 0.06 OrthoFinder output from all 47 species
LOC_Os08g14020.1 LOC_Os08g14020 Endo-1,3;1,4-beta-D-glucanase OS=Zea mays... 0.04 OrthoFinder output from all 47 species
LOC_Os11g17504.1 LOC_Os11g17504 Endo-1,3;1,4-beta-D-glucanase OS=Zea mays... 0.04 OrthoFinder output from all 47 species
LOC_Os11g17540.1 LOC_Os11g17540 Endo-1,3;1,4-beta-D-glucanase OS=Zea mays... 0.05 OrthoFinder output from all 47 species
Lfl_g30764 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp5g09160.1 No alias Endo-1,3;1,4-beta-D-glucanase OS=Zea mays... 0.05 OrthoFinder output from all 47 species
Mp6g21170.1 No alias Endo-1,3;1,4-beta-D-glucanase OS=Zea mays... 0.06 OrthoFinder output from all 47 species
Msp_g34217 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g44157 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g24593 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g51424 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012071 No alias not classified & original description: CDS=82-807 0.02 OrthoFinder output from all 47 species
Sam_g38614 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g080230.3.1 Solyc01g080230 Endo-1,3;1,4-beta-D-glucanase OS=Zea mays... 0.04 OrthoFinder output from all 47 species
Spa_g28086 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e022298_P001 Zm00001e022298 Endo-1,3;1,4-beta-D-glucanase OS=Zea mays... 0.04 OrthoFinder output from all 47 species
Zm00001e022299_P002 Zm00001e022299 Endo-1,3;1,4-beta-D-glucanase OS=Zea mays... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016787 hydrolase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0005319 lipid transporter activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006869 lipid transport IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009606 tropism IEP HCCA
BP GO:0010274 hydrotropism IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
MF GO:0020037 heme binding IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
CC GO:0048046 apoplast IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0061024 membrane organization IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:0120009 intermembrane lipid transfer IEP HCCA
MF GO:0120013 lipid transfer activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR002925 Dienelactn_hydro 74 280
No external refs found!