LOC_Os05g30480.1 (BIP, BIP2, LOC_Os05g30480)


Aliases : BIP, BIP2, LOC_Os05g30480

Description : Heat shock 70 kDa protein BIP3 OS=Oryza sativa subsp. japonica (sp|q6l590|bip3_orysj : 1046.0)


Gene families : OG0000109 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000109_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g30480.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00199940 BIP, BIP2,... Luminal-binding protein OS=Solanum lycopersicum 0.02 OrthoFinder output from all 47 species
AMTR_s00029p00199970 BIP, BIP2,... Luminal-binding protein OS=Solanum lycopersicum 0.02 OrthoFinder output from all 47 species
AMTR_s00137p00032560 Hsp70b External stimuli response.temperature.Hsp... 0.02 OrthoFinder output from all 47 species
Adi_g035631 BIP, BIP2 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g051693 AT-HSC70-1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g055293 BIP, BIP2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g082709 BIP1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g09944 BIP, BIP2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g24576 BIP1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g60664 ATHSP70, HSP70 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene18836.t1 ATHSP70, HSP70,... chaperone *(Hsp70) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene43277.t1 ATHSP70, HSP70,... chaperone *(Hsp70) & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene53803.t1 ATHSP70, HSP70,... chaperone *(Hsp70) & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g06513 ATHSP70, HSP70 chaperone *(Hsp70) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.05G100200.1 ATHSP70, HSP70,... not classified & original description: pacid=50578971... 0.07 OrthoFinder output from all 47 species
Ceric.05G100500.1 ATHSP70, HSP70,... chaperone *(Hsp70) & original description:... 0.01 OrthoFinder output from all 47 species
Ceric.07G076800.1 ATHSP70, HSP70,... chaperone *(Hsp70) & original description:... 0.01 OrthoFinder output from all 47 species
Dac_g41592 ERD2, HSP70T-1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g24119 ATHSP70, HSP70 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01016567001 AT-HSC70-1,... Heat shock cognate 70 kDa protein OS=Petunia hybrida 0.01 OrthoFinder output from all 47 species
Gb_11391 ATHSP70, HSP70 Probable mediator of RNA polymerase II transcription... 0.01 OrthoFinder output from all 47 species
Gb_12488 ATHSP70, HSP70 Probable mediator of RNA polymerase II transcription... 0.02 OrthoFinder output from all 47 species
Gb_29748 ATHSP70, HSP70 Heat shock cognate 70 kDa protein OS=Petunia hybrida... 0.03 OrthoFinder output from all 47 species
LOC_Os06g10990.1 BIP1, LOC_Os06g10990 Luminal-binding protein 4 OS=Nicotiana tabacum... 0.03 OrthoFinder output from all 47 species
Len_g18027 ATHSP70, HSP70 chaperone *(Hsp70) & original description: none 0.01 OrthoFinder output from all 47 species
Lfl_g23161 ATHSP70, HSP70 chaperone *(Hsp70) & original description: none 0.01 OrthoFinder output from all 47 species
MA_160636g0010 ATHSP70, HSP70 Probable mediator of RNA polymerase II transcription... 0.04 OrthoFinder output from all 47 species
Msp_g20736 ATHSP70, HSP70 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g41897 AT-HSC70-1,... not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g63141 ATHSP70, HSP70 not classified & original description: none 0.2 OrthoFinder output from all 47 species
Ppi_g05227 ATHSP70, HSP70 chaperone *(Hsp70) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0021.g008359 BIP, BIP2 not classified & original description: CDS=181-1893 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0166.g024141 ATHSP70, HSP70 chaperone *(Hsp70) & original description: CDS=1-2088 0.02 OrthoFinder output from all 47 species
Solyc03g082920.4.1 BIP, BIP2, Solyc03g082920 Luminal-binding protein 5 OS=Nicotiana tabacum... 0.02 OrthoFinder output from all 47 species
Solyc06g076020.3.1 ATHSP70, HSP70,... chaperone (Hsp70) 0.02 OrthoFinder output from all 47 species
Solyc12g042560.3.1 Hsp70b, Solyc12g042560 Heat shock 70 kDa protein 5 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Spa_g08039 ATHSP70, HSP70 chaperone *(Hsp70) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g39429 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g18983 ATHSP70, HSP70 chaperone *(Hsp70) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR013126 Hsp_70_fam 41 649
No external refs found!