LOC_Os05g29810.1 (ERF72, EBP, ATEBP,...)

Aliases : ERF72, EBP, ATEBP, RAP2.3, LOC_Os05g29810

Description : transcription factor (ERF)

Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os05g29810.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00017p00232330	ERF110,...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	OrthoFinder output from all 47 species
AMTR_s00021p00185480	ERF-1, ATERF-1,...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	OrthoFinder output from all 47 species
AMTR_s00051p00204250	DEAR2,...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	OrthoFinder output from all 47 species
AT1G12630	No alias	Integrase-type DNA-binding superfamily protein	0.03	OrthoFinder output from all 47 species
AT1G46768	RAP2.1	related to AP2 1	0.06	OrthoFinder output from all 47 species
AT4G27950	CRF4	cytokinin response factor 4	0.03	OrthoFinder output from all 47 species
AT5G25810	tny	Integrase-type DNA-binding superfamily protein	0.04	OrthoFinder output from all 47 species
AT5G47230	ERF5, ATERF-5, ATERF5	ethylene responsive element binding factor 5	0.04	OrthoFinder output from all 47 species
Adi_g004344	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g09757	No alias	subgroup ERF-IV/DREB2 transcription factor & original...	0.03	OrthoFinder output from all 47 species
Aev_g14600	RAP2.12	transcription factor component *(HRE/RAP2.12) of...	0.03	OrthoFinder output from all 47 species
Als_g18227	ERF72, EBP, ATEBP, RAP2.3	transcription factor component *(HRE/RAP2.12) of...	0.04	OrthoFinder output from all 47 species
Als_g37025	DEAR3	subgroup ERF-II transcription factor *(ERF16/17/18) &...	0.02	OrthoFinder output from all 47 species
Aop_g12266	DEAR1, CEJ1, ATERF#011	subgroup ERF-II transcription factor *(ERF19/20) &...	0.03	OrthoFinder output from all 47 species
Aspi01Gene08042.t1	DREB2A, DREB2,...	subgroup ERF-IV/DREB2 transcription factor & original...	0.05	OrthoFinder output from all 47 species
Aspi01Gene52705.t1	DREB26, Aspi01Gene52705	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene56620.t1	RAP2.9, DEAR5,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene56622.t1	RAP2.9, DEAR5,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene67784.t1	ERF-1, ATERF-1,...	subgroup ERF-IX transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene70906.t1	Aspi01Gene70906	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.10G018900.1	ERF2, ATERF2,...	subgroup ERF-VI transcription factor & original...	0.03	OrthoFinder output from all 47 species
Dcu_g16100	No alias	subgroup ERF-X transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g47255	No alias	subgroup ERF-VI transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Gb_06962	ERF72, EBP, ATEBP, RAP2.3	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
Gb_20532	DEAR3	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Gb_24891	RAP2.12	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
Gb_26438	HRE1	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
Gb_32995	No alias	Ethylene-responsive transcription factor ERF016...	0.02	OrthoFinder output from all 47 species
LOC_Os04g52090.1	ATERF-9, ERF9,...	transcription factor (ERF)	0.03	OrthoFinder output from all 47 species
LOC_Os09g35020.1	CBF4, DREB1D,...	Dehydration-responsive element-binding protein 1H...	0.04	OrthoFinder output from all 47 species
Lfl_g16995	No alias	cutin and suberin biosynthesis transcription factor...	0.03	OrthoFinder output from all 47 species
MA_19420g0010	No alias	transcription factor (DREB)	0.03	OrthoFinder output from all 47 species
MA_8552524g0010	ERF-1, ATERF-1	transcription factor (ERF)	0.05	OrthoFinder output from all 47 species
MA_94228g0010	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.03	OrthoFinder output from all 47 species
MA_98464g0010	RAP2.4	Ethylene-responsive transcription factor RAP2-4...	0.03	OrthoFinder output from all 47 species
Pnu_g10528	CRF4	subgroup ERF-VI transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pp3c16_13260V3.1	Pp3c16_13260	Integrase-type DNA-binding superfamily protein	0.01	OrthoFinder output from all 47 species
Pp3c5_810V3.1	Pp3c5_810	Integrase-type DNA-binding superfamily protein	0.01	OrthoFinder output from all 47 species
Solyc04g080910.1.1	Solyc04g080910	transcription factor (DREB)	0.02	OrthoFinder output from all 47 species
Solyc06g068360.3.1	Solyc06g068360	transcription factor (ERF)	0.04	OrthoFinder output from all 47 species
Solyc09g075420.3.1	HRE2, Solyc09g075420	transcription factor (ERF)	0.03	OrthoFinder output from all 47 species
Spa_g05270	DEAR1, CEJ1, ATERF#011	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g12974	ORA47	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Spa_g52172	TINY2	subgroup ERF-III transcription factor & original...	0.04	OrthoFinder output from all 47 species
Zm00001e010860_P001	HRE2, Zm00001e010860	transcription factor (ERF)	0.06	OrthoFinder output from all 47 species
Zm00001e016064_P001	RAP2.2, Zm00001e016064	transcription factor (ERF)	0.03	OrthoFinder output from all 47 species
Zm00001e017516_P001	HRE2, Zm00001e017516	transcription factor (ERF)	0.03	OrthoFinder output from all 47 species
Zm00001e026192_P001	HRE2, Zm00001e026192	transcription factor (ERF)	0.03	OrthoFinder output from all 47 species
Zm00001e031438_P002	HRE2, Zm00001e031438	Ethylene-responsive transcription factor RAP2-3...	0.03	OrthoFinder output from all 47 species
Zm00001e034242_P001	RAP2.12, Zm00001e034242	transcription factor (ERF)	0.03	OrthoFinder output from all 47 species
Zm00001e036260_P001	RAP2.12, Zm00001e036260	transcription factor (ERF)	0.03	OrthoFinder output from all 47 species
Zm00001e038888_P001	Zm00001e038888	transcription factor (DREB)	0.02	OrthoFinder output from all 47 species
Zm00001e041539_P001	ERF-1, ATERF-1,...	transcription factor (ERF)	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	53	102

External Links

No external refs found!

LOC_Os05g29810.1 (ERF72, EBP, ATEBP,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation