1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os05g24601.1

LOC_Os05g24601.1 (LOC_Os05g24601)


Aliases : LOC_Os05g24601

Description : subunit delta of cargo adaptor F-subcomplex


Gene families : OG0002181 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002181_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g24601.1
Cluster HCCA: Cluster_143

Target Alias Description ECC score Gene Family Method Actions
AT5G05010 No alias clathrin adaptor complexes medium subunit family protein 0.11 OrthoFinder output from all 47 species
Adi_g059079 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g088072 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.02 OrthoFinder output from all 47 species
Adi_g103954 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.02 OrthoFinder output from all 47 species
Aev_g04019 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.05 OrthoFinder output from all 47 species
Ala_g38100 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.06 OrthoFinder output from all 47 species
Als_g32029 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.09 OrthoFinder output from all 47 species
Als_g32030 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.05 OrthoFinder output from all 47 species
Aop_g02872 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.06 OrthoFinder output from all 47 species
Azfi_s0004.g008406 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.04 OrthoFinder output from all 47 species
Cba_g08477 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.04 OrthoFinder output from all 47 species
Cba_g14345 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.02 OrthoFinder output from all 47 species
Ceric.32G009500.1 Ceric.32G009500 subunit delta of cargo adaptor F-subcomplex & original... 0.06 OrthoFinder output from all 47 species
Cre02.g089100 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.06 OrthoFinder output from all 47 species
Dac_g03342 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.02 OrthoFinder output from all 47 species
Dcu_g08853 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.02 OrthoFinder output from all 47 species
Dcu_g11196 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.13 OrthoFinder output from all 47 species
Dde_g04394 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.02 OrthoFinder output from all 47 species
Ehy_g01445 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01012108001 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.13 OrthoFinder output from all 47 species
Gb_08194 No alias subunit delta of cargo adaptor F-subcomplex 0.05 OrthoFinder output from all 47 species
Len_g00662 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 47 species
Len_g21873 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 47 species
MA_7657529g0010 No alias subunit delta of cargo adaptor F-subcomplex 0.03 OrthoFinder output from all 47 species
Mp3g04840.1 No alias subunit delta of cargo adaptor F-subcomplex 0.05 OrthoFinder output from all 47 species
Msp_g12080 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 47 species
Nbi_g09025 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.09 OrthoFinder output from all 47 species
Pir_g00981 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.02 OrthoFinder output from all 47 species
Ppi_g05201 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.04 OrthoFinder output from all 47 species
Ppi_g32801 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.05 OrthoFinder output from all 47 species
Sam_g18686 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 47 species
Sam_g18687 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.02 OrthoFinder output from all 47 species
Smo172790 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.13 OrthoFinder output from all 47 species
Solyc01g103480.3.1 Solyc01g103480 subunit delta of cargo adaptor F-subcomplex 0.14 OrthoFinder output from all 47 species
Solyc10g038120.3.1 Solyc10g038120 subunit delta of cargo adaptor F-subcomplex 0.03 OrthoFinder output from all 47 species
Spa_g05208 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.06 OrthoFinder output from all 47 species
Spa_g11906 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.06 OrthoFinder output from all 47 species
Spa_g26901 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.05 OrthoFinder output from all 47 species
Tin_g00962 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.07 OrthoFinder output from all 47 species
Tin_g08212 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.04 OrthoFinder output from all 47 species
Zm00001e018368_P003 Zm00001e018368 subunit delta of cargo adaptor F-subcomplex 0.11 OrthoFinder output from all 47 species
Zm00001e039766_P001 Zm00001e039766 subunit delta of cargo adaptor F-subcomplex 0.12 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0017119 Golgi transport complex IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030119 AP-type membrane coat adaptor complex IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030126 COPI vesicle coat IEP HCCA
CC GO:0030131 clathrin adaptor complex IEP HCCA
BP GO:0032012 regulation of ARF protein signal transduction IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046578 regulation of Ras protein signal transduction IEP HCCA
BP GO:0046903 secretion IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140352 export from cell IEP HCCA
BP GO:1902531 regulation of intracellular signal transduction IEP HCCA
InterPro domains Description Start Stop
IPR028565 MHD 282 521
No external refs found!