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Aliases : LOC_Os05g23280
Description : no hits & (original description: none)
Gene families : OG0001023 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001023_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: LOC_Os05g23280.1 | |
| Cluster | HCCA: Cluster_97 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| LOC_Os01g06200.1 | LOC_Os01g06200 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os01g15190.1 | LOC_Os01g15190 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os01g19660.1 | LOC_Os01g19660 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os01g29370.1 | LOC_Os01g29370 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os01g39360.1 | LOC_Os01g39360 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os01g41500.1 | LOC_Os01g41500 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os01g66450.1 | LOC_Os01g66450 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os02g25440.1 | LOC_Os02g25440 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os02g27630.1 | LOC_Os02g27630 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os02g33260.1 | LOC_Os02g33260 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g29660.1 | LOC_Os03g29660 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os03g31640.1 | LOC_Os03g31640 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os03g33290.1 | LOC_Os03g33290 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g36470.1 | LOC_Os03g36470 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os04g01190.1 | LOC_Os04g01190 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os04g14870.1 | LOC_Os04g14870 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os04g19910.1 | LOC_Os04g19910 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os04g21380.1 | LOC_Os04g21380 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os04g24390.1 | LOC_Os04g24390 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os05g17970.1 | LOC_Os05g17970 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os05g20370.1 | LOC_Os05g20370 | no hits & (original description: none) | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os05g20820.1 | LOC_Os05g20820 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os05g24950.1 | LOC_Os05g24950 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os05g28560.1 | LOC_Os05g28560 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os06g22790.1 | LOC_Os06g22790 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os06g23080.1 | LOC_Os06g23080 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os06g29060.1 | LOC_Os06g29060 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os06g35380.1 | LOC_Os06g35380 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os06g37520.1 | LOC_Os06g37520 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os07g13690.1 | LOC_Os07g13690 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os07g14970.1 | LOC_Os07g14970 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os07g18200.1 | LOC_Os07g18200 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os07g20690.1 | LOC_Os07g20690 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os07g27690.1 | LOC_Os07g27690 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os07g44520.1 | LOC_Os07g44520 | no hits & (original description: none) | 0.08 | OrthoFinder output from all 47 species | |
| LOC_Os08g07230.1 | LOC_Os08g07230 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os08g13500.1 | LOC_Os08g13500 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os08g13560.1 | LOC_Os08g13560 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os08g19460.1 | LOC_Os08g19460 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os08g23990.1 | LOC_Os08g23990 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os08g33250.1 | LOC_Os08g33250 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os09g07250.1 | LOC_Os09g07250 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os09g07690.1 | LOC_Os09g07690 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os09g11030.1 | LOC_Os09g11030 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os09g14740.1 | LOC_Os09g14740 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os10g11930.1 | LOC_Os10g11930 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os10g26930.1 | LOC_Os10g26930 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os11g10830.1 | LOC_Os11g10830 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os11g22020.1 | LOC_Os11g22020 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os11g22690.1 | LOC_Os11g22690 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os11g22710.1 | LOC_Os11g22710 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os11g23090.1 | LOC_Os11g23090 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os11g28560.1 | LOC_Os11g28560 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os11g28790.1 | LOC_Os11g28790 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os11g29450.1 | LOC_Os11g29450 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os11g33060.1 | LOC_Os11g33060 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os11g35690.1 | LOC_Os11g35690 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os12g05500.1 | LOC_Os12g05500 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os12g14270.1 | LOC_Os12g14270 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os12g16820.1 | LOC_Os12g16820 | no hits & (original description: none) | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os12g16960.1 | LOC_Os12g16960 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os12g20350.1 | LOC_Os12g20350 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os12g23640.1 | LOC_Os12g23640 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os12g28340.1 | LOC_Os12g28340 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0004518 | nuclease activity | IEP | HCCA |
| MF | GO:0004519 | endonuclease activity | IEP | HCCA |
| MF | GO:0004521 | endoribonuclease activity | IEP | HCCA |
| MF | GO:0004523 | RNA-DNA hybrid ribonuclease activity | IEP | HCCA |
| MF | GO:0004540 | ribonuclease activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | HCCA |
| MF | GO:0016891 | endoribonuclease activity, producing 5'-phosphomonoesters | IEP | HCCA |
| MF | GO:0016893 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | IEP | HCCA |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |