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  5. LOC_Os05g22920.1

LOC_Os05g22920.1 (NOF1, LOC_Os05g22920)


Aliases : NOF1, LOC_Os05g22920

Description : rDNA transcriptional regulator (NOF1)


Gene families : OG0005501 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005501_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g22920.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00182750 NOF1,... RNA biosynthesis.rRNA biogenesis.NOF1 control factor 0.02 OrthoFinder output from all 47 species
AT1G17690 NOF1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.05 OrthoFinder output from all 47 species
Ala_g10991 NOF1 regulatory protein *(NOF1) of rDNA transcription &... 0.02 OrthoFinder output from all 47 species
Azfi_s0050.g031107 NOF1 regulatory protein *(NOF1) of rDNA transcription &... 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000789.38 No alias No description available 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000789.39 No alias RNA biosynthesis.rRNA biogenesis.NOF1 control factor 0.04 OrthoFinder output from all 47 species
Cre04.g218300 NOF1 RNA biosynthesis.rRNA biogenesis.NOF1 control factor 0.09 OrthoFinder output from all 47 species
Dcu_g07063 NOF1 regulatory protein *(NOF1) of rDNA transcription &... 0.05 OrthoFinder output from all 47 species
Dde_g01673 NOF1 regulatory protein *(NOF1) of rDNA transcription &... 0.03 OrthoFinder output from all 47 species
GSVIVT01010908001 NOF1 RNA biosynthesis.rRNA biogenesis.NOF1 control factor 0.05 OrthoFinder output from all 47 species
Gb_20797 NOF1 rDNA transcriptional regulator (NOF1) 0.04 OrthoFinder output from all 47 species
Lfl_g09232 NOF1 regulatory protein *(NOF1) of rDNA transcription &... 0.03 OrthoFinder output from all 47 species
MA_10437067g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Mp7g03720.1 NOF1 rDNA transcriptional regulator (NOF1) 0.05 OrthoFinder output from all 47 species
Ppi_g01193 NOF1 regulatory protein *(NOF1) of rDNA transcription &... 0.02 OrthoFinder output from all 47 species
Sam_g12400 No alias regulatory protein *(NOF1) of rDNA transcription &... 0.06 OrthoFinder output from all 47 species
Solyc07g009350.4.1 NOF1, Solyc07g009350 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Tin_g18828 NOF1 regulatory protein *(NOF1) of rDNA transcription &... 0.04 OrthoFinder output from all 47 species
Zm00001e039338_P003 NOF1, Zm00001e039338 rDNA transcriptional regulator (NOF1) 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004609 phosphatidylserine decarboxylase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0017150 tRNA dihydrouridine synthase activity IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0106413 dihydrouridine synthase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR010678 UTP25 188 663
No external refs found!