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  5. LOC_Os05g14300.1

LOC_Os05g14300.1 (UBC25, PFU1, LOC_Os05g14300)


Aliases : UBC25, PFU1, LOC_Os05g14300

Description : Probable ubiquitin-conjugating enzyme E2 25 OS=Arabidopsis thaliana (sp|q9luq5|ubc25_arath : 302.0)


Gene families : OG0001231 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001231_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g14300.1

Target Alias Description ECC score Gene Family Method Actions
Ala_g13680 UBC24, PHO2, ATUBC24 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g06748 PFU2, UBC23 E2 ubiquitin-conjugating protein *(PHO2) & original... 0.05 OrthoFinder output from all 47 species
Cba_g72571 PFU2, UBC23 E2 ubiquitin-conjugating protein *(PHO2) & original... 0.02 OrthoFinder output from all 47 species
Dac_g10716 PFU2, UBC23 E2 ubiquitin-conjugating protein *(PHO2) & original... 0.02 OrthoFinder output from all 47 species
Gb_38611 UBC24, PHO2, ATUBC24 Probable ubiquitin-conjugating enzyme E2 24... 0.02 OrthoFinder output from all 47 species
Lfl_g28843 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g26572 UBC24, PHO2, ATUBC24 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005694 chromosome IEP HCCA
CC GO:0005744 TIM23 mitochondrial import inner membrane translocase complex IEP HCCA
BP GO:0006606 protein import into nucleus IEP HCCA
BP GO:0006839 mitochondrial transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007051 spindle organization IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0030014 CCR4-NOT complex IEP HCCA
BP GO:0030150 protein import into mitochondrial matrix IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0031023 microtubule organizing center organization IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0034504 protein localization to nucleus IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0044743 protein transmembrane import into intracellular organelle IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051170 import into nucleus IEP HCCA
BP GO:0051225 spindle assembly IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
MF GO:0061608 nuclear import signal receptor activity IEP HCCA
BP GO:0065002 intracellular protein transmembrane transport IEP HCCA
BP GO:0070585 protein localization to mitochondrion IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0070925 organelle assembly IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0071806 protein transmembrane transport IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072655 establishment of protein localization to mitochondrion IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140142 nucleocytoplasmic carrier activity IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:0140694 non-membrane-bounded organelle assembly IEP HCCA
BP GO:1990542 mitochondrial transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 186 322
No external refs found!