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  5. LOC_Os05g12230.1

LOC_Os05g12230.1 (LOC_Os05g12230)


Aliases : LOC_Os05g12230

Description : no hits & (original description: none)


Gene families : OG0000004 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g12230.1

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene01235.t1 Aspi01Gene01235 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene43258.t1 Aspi01Gene43258 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene52277.t1 CRK8, Aspi01Gene52277 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.15G026100.1 Ceric.15G026100 not classified & original description: pacid=50640205... 0.02 OrthoFinder output from all 47 species
Ceric.39G047300.1 Ceric.39G047300 not classified & original description: pacid=50583289... 0.02 OrthoFinder output from all 47 species
Dcu_g00517 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c1_21700V3.1 Pp3c1_21700 No annotation 0.02 OrthoFinder output from all 47 species
Pp3c3_32070V3.1 Pp3c3_32070 No annotation 0.01 OrthoFinder output from all 47 species
Solyc05g026245.1.1 Solyc05g026245 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc11g061755.1.1 Solyc11g061755 Retrovirus-related Pol polyprotein from transposon TNT... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!