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  5. LOC_Os05g11250.1

LOC_Os05g11250.1 (LOC_Os05g11250)


Aliases : LOC_Os05g11250

Description : no hits & (original description: none)


Gene families : OG0001211 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001211_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g11250.1
Cluster HCCA: Cluster_181

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00056p00095990 evm_27.TU.AmTr_v1... Lachrymatory-factor synthase OS=Allium cepa 0.04 OrthoFinder output from all 47 species
Als_g22490 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g19743 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.05G013400.1 Ceric.05G013400 not classified & original description: pacid=50578169... 0.06 OrthoFinder output from all 47 species
Ceric.1Z038800.1 Ceric.1Z038800 not classified & original description: pacid=50569354... 0.02 OrthoFinder output from all 47 species
Ceric.1Z039200.1 Ceric.1Z039200 not classified & original description: pacid=50569355... 0.02 OrthoFinder output from all 47 species
Ceric.1Z118400.1 Ceric.1Z118400 not classified & original description: pacid=50604680... 0.03 OrthoFinder output from all 47 species
Ceric.35G067200.1 Ceric.35G067200 not classified & original description: pacid=50581065... 0.04 OrthoFinder output from all 47 species
Ceric.39G051100.1 Ceric.39G051100 not classified & original description: pacid=50583326... 0.03 OrthoFinder output from all 47 species
Dcu_g18093 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_02241 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_02243 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_13846 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_20236 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os05g11210.1 LOC_Os05g11210 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_37077g0020 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp2g06720.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp8g11680.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g27001 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g44677 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g52123 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc08g066420.1.1 Solyc08g066420 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
InterPro domains Description Start Stop
IPR019587 Polyketide_cyclase/dehydratase 33 195
No external refs found!