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  5. LOC_Os05g08980.3

LOC_Os05g08980.3 (LOC_Os05g08980)


Aliases : LOC_Os05g08980

Description : no hits & (original description: none)


Gene families : OG0001138 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001138_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g08980.3

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00090p00126740 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Als_g06191 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.03G044300.1 Ceric.03G044300 not classified & original description: pacid=50571937... 0.01 OrthoFinder output from all 47 species
Len_g07573 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Mp2g05340.3 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g07967 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g09483 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g09184 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g13185 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g01863 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04455 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e031165_P001 Zm00001e031165 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
MF GO:0004197 cysteine-type endopeptidase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
BP GO:0016485 protein processing IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071586 CAAX-box protein processing IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR012458 DUF1664 97 218
No external refs found!