LOC_Os05g06350.1 (IMPA-1, IMPA1,...)


Aliases : IMPA-1, IMPA1, AT-IMP, ATKAP ALPHA, AIMP ALPHA, LOC_Os05g06350

Description : importin alpha adaptor proteins


Gene families : OG0000665 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000665_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g06350.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00147p00043750 IMPA-1, IMPA1,... Protein translocation.nucleus.nucleocytoplasmic... 0.04 OrthoFinder output from all 47 species
AT1G32880 No alias ARM repeat superfamily protein 0.04 OrthoFinder output from all 47 species
AT4G16143 IMPA-2 importin alpha isoform 2 0.05 OrthoFinder output from all 47 species
Adi_g015994 IMPA-2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g112178 IMPA-1, IMPA1,... nucleocytoplasmic transport cargo adaptor protein... 0.02 OrthoFinder output from all 47 species
Ala_g09820 IMPA-1, IMPA1,... nucleocytoplasmic transport cargo adaptor protein... 0.02 OrthoFinder output from all 47 species
Als_g04989 IMPA-1, IMPA1,... nucleocytoplasmic transport cargo adaptor protein... 0.02 OrthoFinder output from all 47 species
Als_g21187 IMPA-1, IMPA1,... nucleocytoplasmic transport cargo adaptor protein... 0.04 OrthoFinder output from all 47 species
Als_g48115 IMPA-1, IMPA1,... nucleocytoplasmic transport cargo adaptor protein... 0.02 OrthoFinder output from all 47 species
Aspi01Gene05417.t1 IMPA-3, MOS6,... nucleocytoplasmic transport cargo adaptor protein... 0.02 OrthoFinder output from all 47 species
Cba_g11822 IMPA-1, IMPA1,... nucleocytoplasmic transport cargo adaptor protein... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020912.85 No alias Importin subunit alpha OS=Solanum lycopersicum 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021721.27 IMPA-2 Protein translocation.nucleus.nucleocytoplasmic... 0.04 OrthoFinder output from all 47 species
Cre04.g215850 IMPA-1, IMPA1,... Protein translocation.nucleus.nucleocytoplasmic... 0.02 OrthoFinder output from all 47 species
GSVIVT01028079001 IMPA-1, IMPA1,... Protein translocation.nucleus.nucleocytoplasmic... 0.04 OrthoFinder output from all 47 species
GSVIVT01031205001 IMPA-1, IMPA1,... Protein translocation.nucleus.nucleocytoplasmic... 0.03 OrthoFinder output from all 47 species
GSVIVT01035047001 IMPA-2 Protein translocation.nucleus.nucleocytoplasmic... 0.06 OrthoFinder output from all 47 species
Gb_02102 IMPA-2 Importin subunit alpha-1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Lfl_g21839 IMPA-1, IMPA1,... nucleocytoplasmic transport cargo adaptor protein... 0.02 OrthoFinder output from all 47 species
MA_138621g0010 IMPA-1, IMPA1,... importin alpha adaptor proteins 0.02 OrthoFinder output from all 47 species
Mp1g13020.1 IMPA-1, IMPA1,... importin alpha adaptor proteins 0.02 OrthoFinder output from all 47 species
Smo266556 IMPA-1, IMPA1,... Protein translocation.nucleus.nucleocytoplasmic... 0.02 OrthoFinder output from all 47 species
Solyc01g100720.3.1 IMPA-4, Solyc01g100720 importin alpha adaptor proteins 0.02 OrthoFinder output from all 47 species
Tin_g04020 IMPA-1, IMPA1,... nucleocytoplasmic transport cargo adaptor protein... 0.03 OrthoFinder output from all 47 species
Tin_g06664 IMPA-1, IMPA1,... nucleocytoplasmic transport cargo adaptor protein... 0.02 OrthoFinder output from all 47 species
Zm00001e026752_P003 IMPA-1, IMPA1,... importin alpha adaptor proteins 0.05 OrthoFinder output from all 47 species
Zm00001e031157_P001 IMPA-1, IMPA1,... importin alpha adaptor proteins 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
BP GO:0006606 protein import into nucleus IEA Interproscan
MF GO:0061608 nuclear import signal receptor activity IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
CC GO:0016020 membrane IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
InterPro domains Description Start Stop
IPR032413 Arm_3 461 506
IPR002652 Importin-a_IBB 12 100
IPR000225 Armadillo 364 403
IPR000225 Armadillo 195 236
IPR000225 Armadillo 408 445
IPR000225 Armadillo 111 151
IPR000225 Armadillo 322 362
IPR000225 Armadillo 280 318
IPR000225 Armadillo 249 277
IPR000225 Armadillo 154 192
No external refs found!