1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os05g06280.1

LOC_Os05g06280.1 (ATKINESIN-13A,...)


Aliases : ATKINESIN-13A, KINESIN-13A, LOC_Os05g06280

Description : microtubule destabilizing motor protein (Kinesin-13). component U1A of U1 small nuclear ribonucleoprotein particle (snRNP). motor protein (Kinesin-13)


Gene families : OG0001277 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001277_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g06280.1

Target Alias Description ECC score Gene Family Method Actions
AT3G16060 No alias ATP binding microtubule motor family protein 0.03 OrthoFinder output from all 47 species
AT3G16630 ATKINESIN-13A,... P-loop containing nucleoside triphosphate hydrolases... 0.11 OrthoFinder output from all 47 species
Adi_g112685 ATKINESIN-13A,... Kinesin-13-type motor protein & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g14611 ATKINESIN-13A,... Kinesin-13-type motor protein & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g27801 ATKINESIN-13A,... Kinesin-13-type motor protein & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g16042 ATKINESIN-13A,... Kinesin-13-type motor protein & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g03596 ATKINESIN-13A,... Kinesin-13-type motor protein & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0072.g036960 ATKINESIN-13A,... Kinesin-13-type motor protein & original description:... 0.03 OrthoFinder output from all 47 species
Cba_g14741 ATKINESIN-13A,... Kinesin-13-type motor protein & original description: none 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020553.163 No alias Cytoskeleton.microtubular network.Kinesin... 0.03 OrthoFinder output from all 47 species
Dac_g09149 ATKINESIN-13A,... Kinesin-13-type motor protein & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g08735 ATKINESIN-13A,... Kinesin-13-type motor protein & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g11775 ATKINESIN-13A,... Kinesin-13-type motor protein & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g16224 ATKINESIN-13A,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g04984 ATKINESIN-13A,... Kinesin-13-type motor protein & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g25073 ATKINESIN-13A,... Kinesin-13-type motor protein & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01015391001 No alias Cytoskeleton.microtubular network.Kinesin... 0.02 OrthoFinder output from all 47 species
Gb_02027 ATKINESIN-13A,... microtubule destabilizing motor protein (Kinesin-13).... 0.03 OrthoFinder output from all 47 species
Len_g11756 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g18925 ATKINESIN-13A,... Kinesin-13-type motor protein & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g02339 ATKINESIN-13A,... Kinesin-13-type motor protein & original description: none 0.04 OrthoFinder output from all 47 species
MA_95857g0010 ATKINESIN-13A,... microtubule destabilizing motor protein (Kinesin-13).... 0.04 OrthoFinder output from all 47 species
Mp1g23880.1 ATKINESIN-13A,... microtubule destabilizing motor protein (Kinesin-13).... 0.03 OrthoFinder output from all 47 species
Msp_g12119 ATKINESIN-13A,... Kinesin-13-type motor protein & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g03815 ATKINESIN-13A,... Kinesin-13-type motor protein & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g38743 ATKINESIN-13A,... Kinesin-13-type motor protein & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g06716 ATKINESIN-13A,... Kinesin-13-type motor protein & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g06495 ATKINESIN-13A,... Kinesin-13-type motor protein & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g27137 No alias Kinesin-13-type motor protein & original description: none 0.02 OrthoFinder output from all 47 species
Solyc05g054260.3.1 ATKINESIN-13A,... microtubule destabilizing motor protein (Kinesin-13).... 0.07 OrthoFinder output from all 47 species
Solyc12g099540.2.1 ATKINESIN-13A,... microtubule destabilizing motor protein (Kinesin-13).... 0.02 OrthoFinder output from all 47 species
Spa_g30608 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g50185 ATKINESIN-13A,... Kinesin-13-type motor protein & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g11411 ATKINESIN-13A,... Kinesin-13-type motor protein & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e026282_P001 ATKINESIN-13A,... microtubule destabilizing motor protein (Kinesin-13).... 0.11 OrthoFinder output from all 47 species
Zm00001e026744_P001 ATKINESIN-13A,... microtubule destabilizing motor protein (Kinesin-13).... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0003777 microtubule motor activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0007018 microtubule-based movement IEA Interproscan
MF GO:0008017 microtubule binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046903 secretion IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0140352 export from cell IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 1027 1087
IPR000504 RRM_dom 871 941
IPR001752 Kinesin_motor_dom 197 498
No external refs found!