1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os05g04430.1

LOC_Os05g04430.1 (LOC_Os05g04430)


Aliases : LOC_Os05g04430

Description : no hits & (original description: none)


Gene families : OG0002640 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002640_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g04430.1
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g35470.1 LOC_Os01g35470 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os03g03240.1 LOC_Os03g03240 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os04g03950.1 LOC_Os04g03950 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os04g05310.1 LOC_Os04g05310 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os04g05680.1 LOC_Os04g05680 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os04g10190.1 LOC_Os04g10190 no hits & (original description: none) 0.12 OrthoFinder output from all 47 species
LOC_Os04g13020.1 LOC_Os04g13020 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os04g24080.1 LOC_Os04g24080 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os04g53270.1 LOC_Os04g53270 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os05g31430.1 LOC_Os05g31430 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os06g14600.1 LOC_Os06g14600 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os06g29750.1 LOC_Os06g29750 no hits & (original description: none) 0.13 OrthoFinder output from all 47 species
LOC_Os06g33260.1 LOC_Os06g33260 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os06g45530.1 LOC_Os06g45530 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os06g47370.1 LOC_Os06g47370 no hits & (original description: none) 0.16 OrthoFinder output from all 47 species
LOC_Os06g48460.1 LOC_Os06g48460 no hits & (original description: none) 0.13 OrthoFinder output from all 47 species
LOC_Os07g26800.1 LOC_Os07g26800 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os07g45660.1 LOC_Os07g45660 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os07g45710.1 LOC_Os07g45710 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os08g10180.1 LOC_Os08g10180 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os08g12400.1 LOC_Os08g12400 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os08g27300.1 LOC_Os08g27300 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os09g10080.1 LOC_Os09g10080 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os09g22350.1 LOC_Os09g22350 no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
LOC_Os10g17230.1 LOC_Os10g17230 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os10g31600.1 LOC_Os10g31600 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os10g40160.1 LOC_Os10g40160 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os11g15100.1 LOC_Os11g15100 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os11g24920.1 LOC_Os11g24920 no hits & (original description: none) 0.12 OrthoFinder output from all 47 species
LOC_Os12g09870.1 LOC_Os12g09870 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os12g27700.1 LOC_Os12g27700 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os12g28200.1 LOC_Os12g28200 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os12g33890.1 LOC_Os12g33890 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0015074 DNA integration IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR010685 DUF1263 645 682
No external refs found!