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  5. LOC_Os05g03040.1

LOC_Os05g03040.1 (RAP2.7, TOE1, LOC_Os05g03040)


Aliases : RAP2.7, TOE1, LOC_Os05g03040

Description : transcription factor (AP2)


Gene families : OG0000110 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000110_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g03040.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00035p00205430 AP2, FLO2, FL1,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.09 OrthoFinder output from all 47 species
AMTR_s00202p00017170 WRI1, ATWRI1,... External stimuli response.biotic... 0.05 OrthoFinder output from all 47 species
AT4G37750 DRG, CKC, CKC1, ANT Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
Aev_g09099 RAP2.7, TOE1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g22039 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Aop_g06262 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Cba_g52321 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Ceric.15G054600.1 PLT2, Ceric.15G054600 AP2-type transcription factor *(WRI/AIL) & original... 0.02 OrthoFinder output from all 47 species
Cre01.g009650 RAP2.7, TOE1 RNA biosynthesis.transcriptional activation.AP2/ERF... 0.01 OrthoFinder output from all 47 species
Dac_g06510 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.02 OrthoFinder output from all 47 species
Dde_g30317 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.02 OrthoFinder output from all 47 species
Dde_g42409 AP2, FLO2, FL1 AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g24256 RAP2.7, TOE1 AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01016352001 RAP2.7, TOE1 RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 OrthoFinder output from all 47 species
GSVIVT01016764001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 OrthoFinder output from all 47 species
GSVIVT01023697001 ADAP RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 OrthoFinder output from all 47 species
GSVIVT01025548001 RAP2.7, TOE1 RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
Gb_11937 WRI1, ATWRI1, ASML1, WRI transcription factor (AP2) 0.03 OrthoFinder output from all 47 species
Gb_39931 WRI1, ATWRI1, ASML1, WRI transcription factor (AP2) 0.02 OrthoFinder output from all 47 species
Gb_41702 ADAP transcription factor (AP2) 0.02 OrthoFinder output from all 47 species
MA_121578g0010 DRG, CKC, CKC1, ANT transcription factor (AP2) 0.02 OrthoFinder output from all 47 species
MA_30905g0010 WRI1, ATWRI1, ASML1, WRI transcription factor (AP2) 0.05 OrthoFinder output from all 47 species
Msp_g32091 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.02 OrthoFinder output from all 47 species
Nbi_g09452 BBM AP2-type transcription factor *(WRI/AIL) & original... 0.02 OrthoFinder output from all 47 species
Nbi_g25934 PLT2 AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Nbi_g28976 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Pir_g37090 ADAP RAM1-dependent transcription factor *(WRI5) & original... 0.04 OrthoFinder output from all 47 species
Pp3c22_17870V3.1 Pp3c22_17870 target of early activation tagged (EAT) 2 0.01 OrthoFinder output from all 47 species
Sam_g37210 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.02 OrthoFinder output from all 47 species
Solyc03g123430.4.1 Solyc03g123430 transcription factor (AP2) 0.03 OrthoFinder output from all 47 species
Solyc04g049800.3.1 RAP2.7, TOE1,... transcription factor (AP2) 0.04 OrthoFinder output from all 47 species
Solyc09g007260.4.1 RAP2.7, TOE1,... transcription factor (AP2) 0.04 OrthoFinder output from all 47 species
Solyc11g010710.2.1 PLT3, AIL6,... transcription factor (AP2) 0.04 OrthoFinder output from all 47 species
Spa_g10818 PLT2 AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Spa_g57166 AP2, FLO2, FL1 AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Tin_g40561 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e000558_P003 Zm00001e000558 transcription factor (AP2) 0.03 OrthoFinder output from all 47 species
Zm00001e006752_P001 AP2, FLO2, FL1,... transcription factor (AP2) 0.04 OrthoFinder output from all 47 species
Zm00001e027593_P003 AP2, FLO2, FL1,... transcription factor (AP2) 0.03 OrthoFinder output from all 47 species
Zm00001e029525_P003 RAP2.7, TOE1,... transcription factor (AP2) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 170 219
IPR001471 AP2/ERF_dom 262 312
No external refs found!