LOC_Os05g01600.2 (ACT7, LOC_Os05g01600)


Aliases : ACT7, LOC_Os05g01600

Description : actin filament protein


Gene families : OG0000179 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000179_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g01600.2

Target Alias Description ECC score Gene Family Method Actions
AT2G37620 AAc1, ACT1 actin 1 0.03 OrthoFinder output from all 47 species
AT3G46520 ACT12 actin-12 0.03 OrthoFinder output from all 47 species
AT5G09810 ACT7 actin 7 0.04 OrthoFinder output from all 47 species
Adi_g007880 ACT7 actin filament protein & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g051262 AAc1, ACT1 actin filament protein & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17259 ACT7 actin filament protein & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06954 ACT7 actin filament protein & original description: none 0.02 OrthoFinder output from all 47 species
Als_g10475 ACT7 actin filament protein & original description: none 0.03 OrthoFinder output from all 47 species
Als_g52378 ACT7 actin filament protein & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g03449 ACT7 actin filament protein & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g06911 ACT7 actin filament protein & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g07060 ACT7 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g10571 ACT7 actin filament protein & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g12151 ACT7 actin filament protein & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g37499 ACT7 actin filament protein & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G030400.1 ACT7, Ceric.01G030400 actin filament protein & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.19G061600.1 ACT7, Ceric.19G061600 actin filament protein & original description:... 0.04 OrthoFinder output from all 47 species
Cre13.g603700 ACT11 Cytoskeleton.microfilament network.actin filament protein 0.04 OrthoFinder output from all 47 species
Dac_g03247 ACT7 actin filament protein & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g05051 ACT7 actin filament protein & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g19071 ACT7 actin filament protein & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01003099001 ACT7 Actin-1 OS=Oryza sativa subsp. indica 0.02 OrthoFinder output from all 47 species
GSVIVT01026580001 ACT7 Cytoskeleton.microfilament network.actin filament protein 0.04 OrthoFinder output from all 47 species
Gb_04045 ACT11 actin filament protein 0.03 OrthoFinder output from all 47 species
Gb_08812 ACT7 actin filament protein 0.05 OrthoFinder output from all 47 species
Gb_25131 ACT7 actin filament protein 0.03 OrthoFinder output from all 47 species
Len_g05637 AAc1, ACT1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g18457 ACT7 actin filament protein & original description: none 0.02 OrthoFinder output from all 47 species
Len_g28710 ACT7 actin filament protein & original description: none 0.03 OrthoFinder output from all 47 species
Len_g56617 ACT7 actin filament protein & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06946 ACT7 actin filament protein & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g04666 ACT7 actin filament protein & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g08784 ACT7 actin filament protein & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g36250 ACT11 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g09339 ACT7 actin filament protein & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g03053 ACT7 actin filament protein & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g06007 ACT7 actin filament protein & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g08921 ACT11 actin filament protein & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g46457 ACT7 actin filament protein & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001863 ACT7 actin filament protein & original description: CDS=1-1344 0.02 OrthoFinder output from all 47 species
Sam_g26264 No alias actin filament protein & original description: none 0.02 OrthoFinder output from all 47 species
Smo178381 ACT7 Cytoskeleton.microfilament network.actin filament protein 0.03 OrthoFinder output from all 47 species
Spa_g20294 ACT7 actin filament protein & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g22103 ACT7 actin filament protein & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g54124 ACT7 actin filament protein & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005096 GTPase activator activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007051 spindle organization IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0015098 molybdate ion transmembrane transporter activity IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
BP GO:0015689 molybdate ion transport IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030126 COPI vesicle coat IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0032012 regulation of ARF protein signal transduction IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046578 regulation of Ras protein signal transduction IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051225 spindle assembly IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
CC GO:0070652 HAUS complex IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0070925 organelle assembly IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
BP GO:0140694 non-membrane-bounded organelle assembly IEP HCCA
BP GO:1902531 regulation of intracellular signal transduction IEP HCCA
InterPro domains Description Start Stop
IPR004000 Actin 5 377
No external refs found!