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  5. LOC_Os05g01444.1

LOC_Os05g01444.1 (ATPGIP1, PGIP1, LOC_Os05g01444)


Aliases : ATPGIP1, PGIP1, LOC_Os05g01444

Description : pathogen polygalacturonase inhibitor (PGIP)


Gene families : OG0002518 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002518_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g01444.1
Cluster HCCA: Cluster_138

Target Alias Description ECC score Gene Family Method Actions
AT5G06870 PGIP2, ATPGIP2 polygalacturonase inhibiting protein 2 0.03 OrthoFinder output from all 47 species
Aev_g34575 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_04975 No alias Receptor-like protein Cf-9 homolog OS=Solanum... 0.03 OrthoFinder output from all 47 species
Gb_34873 No alias LRR receptor-like serine/threonine-protein kinase GSO1... 0.02 OrthoFinder output from all 47 species
LOC_Os05g01370.1 LOC_Os05g01370 pathogen polygalacturonase inhibitor (PGIP) 0.04 OrthoFinder output from all 47 species
LOC_Os07g38130.1 LOC_Os07g38130 pathogen polygalacturonase inhibitor (PGIP) 0.03 OrthoFinder output from all 47 species
LOC_Os08g39940.1 ATPGIP1, PGIP1,... Polygalacturonase inhibitor 1 OS=Oryza sativa subsp.... 0.01 OrthoFinder output from all 47 species
LOC_Os09g31450.1 LOC_Os09g31450 pathogen polygalacturonase inhibitor (PGIP) 0.02 OrthoFinder output from all 47 species
MA_10429114g0010 No alias Receptor-like protein Cf-9 homolog OS=Solanum... 0.02 OrthoFinder output from all 47 species
MA_10434490g0010 No alias Receptor-like protein Cf-9 homolog OS=Solanum... 0.02 OrthoFinder output from all 47 species
MA_10436129g0010 No alias Receptor-like protein 9DC3 OS=Solanum pimpinellifolium... 0.03 OrthoFinder output from all 47 species
MA_170534g0010 No alias Tyrosine-sulfated glycopeptide receptor 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_175577g0010 FLS2 DNA damage-repair/toleration protein DRT100... 0.02 OrthoFinder output from all 47 species
MA_177713g0010 No alias LRR receptor-like serine/threonine-protein kinase GSO1... 0.03 OrthoFinder output from all 47 species
MA_215266g0020 No alias Receptor-like protein 9DC3 OS=Solanum pimpinellifolium... 0.03 OrthoFinder output from all 47 species
MA_478919g0010 PSKR2, AtPSKR2 LRR receptor-like serine/threonine-protein kinase FLS2... 0.01 OrthoFinder output from all 47 species
MA_59810g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_803538g0010 No alias Receptor like protein 21 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_8806113g0010 No alias Receptor-like protein 9DC3 OS=Solanum pimpinellifolium... 0.02 OrthoFinder output from all 47 species
MA_9047991g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_9792225g0010 No alias Receptor-like protein 9DC3 OS=Solanum pimpinellifolium... 0.05 OrthoFinder output from all 47 species
Ore_g35726 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g28261 ATPGIP1, PGIP1 pathogen polygalacturonase inhibitor *(PGIP) & original... 0.02 OrthoFinder output from all 47 species
Solyc09g014480.3.1 PGIP2, ATPGIP2,... pathogen polygalacturonase inhibitor (PGIP) 0.04 OrthoFinder output from all 47 species
Solyc09g014590.3.1 FLR1, FLOR1,... pathogen polygalacturonase inhibitor (PGIP) 0.03 OrthoFinder output from all 47 species
Zm00001e029700_P001 ATPGIP1, PGIP1,... pathogen polygalacturonase inhibitor (PGIP) 0.05 OrthoFinder output from all 47 species
Zm00001e029701_P001 ATPGIP1, PGIP1,... pathogen polygalacturonase inhibitor (PGIP) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
CC GO:0005779 obsolete integral component of peroxisomal membrane IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016559 peroxisome fission IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0048285 organelle fission IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 188 248
IPR013210 LRR_N_plant-typ 88 123
No external refs found!