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  5. LOC_Os05g01380.1

LOC_Os05g01380.1 (PGIP2, ATPGIP2, LOC_Os05g01380)


Aliases : PGIP2, ATPGIP2, LOC_Os05g01380

Description : pathogen polygalacturonase inhibitor (PGIP)


Gene families : OG0002518 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002518_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g01380.1
Cluster HCCA: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00219620 PGIP2, ATPGIP2,... Polygalacturonase inhibitor 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT5G06870 PGIP2, ATPGIP2 polygalacturonase inhibiting protein 2 0.03 OrthoFinder output from all 47 species
Aev_g34575 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01032044001 No alias Polygalacturonase inhibitor OS=Pyrus communis 0.01 OrthoFinder output from all 47 species
GSVIVT01033370001 ATPGIP1, PGIP1 Polygalacturonase inhibitor OS=Vitis vinifera 0.01 OrthoFinder output from all 47 species
Gb_04975 No alias Receptor-like protein Cf-9 homolog OS=Solanum... 0.06 OrthoFinder output from all 47 species
Gb_34873 No alias LRR receptor-like serine/threonine-protein kinase GSO1... 0.04 OrthoFinder output from all 47 species
LOC_Os05g01370.1 LOC_Os05g01370 pathogen polygalacturonase inhibitor (PGIP) 0.04 OrthoFinder output from all 47 species
LOC_Os05g01430.1 ATPGIP1, PGIP1,... pathogen polygalacturonase inhibitor (PGIP) 0.01 OrthoFinder output from all 47 species
LOC_Os07g38130.1 LOC_Os07g38130 pathogen polygalacturonase inhibitor (PGIP) 0.03 OrthoFinder output from all 47 species
LOC_Os08g39940.1 ATPGIP1, PGIP1,... Polygalacturonase inhibitor 1 OS=Oryza sativa subsp.... 0.01 OrthoFinder output from all 47 species
LOC_Os09g31450.1 LOC_Os09g31450 pathogen polygalacturonase inhibitor (PGIP) 0.02 OrthoFinder output from all 47 species
MA_10434490g0010 No alias Receptor-like protein Cf-9 homolog OS=Solanum... 0.02 OrthoFinder output from all 47 species
MA_175577g0010 FLS2 DNA damage-repair/toleration protein DRT100... 0.02 OrthoFinder output from all 47 species
MA_177713g0010 No alias LRR receptor-like serine/threonine-protein kinase GSO1... 0.03 OrthoFinder output from all 47 species
MA_215266g0020 No alias Receptor-like protein 9DC3 OS=Solanum pimpinellifolium... 0.02 OrthoFinder output from all 47 species
MA_478919g0010 PSKR2, AtPSKR2 LRR receptor-like serine/threonine-protein kinase FLS2... 0.01 OrthoFinder output from all 47 species
MA_59810g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_87079g0010 No alias LRR receptor-like serine/threonine-protein kinase FLS2... 0.03 OrthoFinder output from all 47 species
MA_8806113g0010 No alias Receptor-like protein 9DC3 OS=Solanum pimpinellifolium... 0.02 OrthoFinder output from all 47 species
MA_9047991g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_9792225g0010 No alias Receptor-like protein 9DC3 OS=Solanum pimpinellifolium... 0.03 OrthoFinder output from all 47 species
Ore_g35726 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc09g014480.3.1 PGIP2, ATPGIP2,... pathogen polygalacturonase inhibitor (PGIP) 0.05 OrthoFinder output from all 47 species
Zm00001e029700_P001 ATPGIP1, PGIP1,... pathogen polygalacturonase inhibitor (PGIP) 0.1 OrthoFinder output from all 47 species
Zm00001e029701_P001 ATPGIP1, PGIP1,... pathogen polygalacturonase inhibitor (PGIP) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 143 164
IPR013210 LRR_N_plant-typ 28 64
No external refs found!