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  5. LOC_Os04g57020.2

LOC_Os04g57020.2 (LOC_Os04g57020)


Aliases : LOC_Os04g57020

Description : Probable plastid-lipid-associated protein 13, chloroplastic OS=Arabidopsis thaliana (sp|q8s9m1|pap13_arath : 315.0)


Gene families : OG0006752 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006752_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g57020.2

Target Alias Description ECC score Gene Family Method Actions
AT3G58010 PGL34 plastoglobulin 34kD 0.04 OrthoFinder output from all 47 species
Adi_g023091 No alias Fibrillin plastoglobule core protein *(FBN7) & original... 0.03 OrthoFinder output from all 47 species
Aob_g10138 No alias Fibrillin plastoglobule core protein *(FBN7) & original... 0.04 OrthoFinder output from all 47 species
Aop_g10381 No alias Fibrillin plastoglobule core protein *(FBN7) & original... 0.03 OrthoFinder output from all 47 species
Ceric.10G028700.1 PGL34, Ceric.10G028700 Fibrillin plastoglobule core protein *(FBN7) & original... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020851.6 No alias No description available 0.02 OrthoFinder output from all 47 species
Dac_g02675 PGL34 Fibrillin plastoglobule core protein *(FBN7) & original... 0.02 OrthoFinder output from all 47 species
Dcu_g03622 No alias Fibrillin plastoglobule core protein *(FBN7) & original... 0.02 OrthoFinder output from all 47 species
Lfl_g38412 No alias Fibrillin plastoglobule core protein *(FBN7) & original... 0.04 OrthoFinder output from all 47 species
MA_7472844g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g07883 No alias Fibrillin plastoglobule core protein *(FBN7) & original... 0.06 OrthoFinder output from all 47 species
Pir_g00894 No alias Fibrillin plastoglobule core protein *(FBN7) & original... 0.03 OrthoFinder output from all 47 species
Ppi_g00681 No alias Fibrillin plastoglobule core protein *(FBN7) & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000021 PGL34 Fibrillin plastoglobule core protein *(FBN7) & original... 0.02 OrthoFinder output from all 47 species
Sam_g07517 No alias Fibrillin plastoglobule core protein *(FBN7) & original... 0.04 OrthoFinder output from all 47 species
Zm00001e006628_P001 Zm00001e006628 Probable plastid-lipid-associated protein 13,... 0.06 OrthoFinder output from all 47 species
Zm00001e041869_P002 Zm00001e041869 Probable plastid-lipid-associated protein 9,... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003951 NAD+ kinase activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006739 NADP metabolic process IEP HCCA
BP GO:0006741 NADP biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP HCCA
BP GO:0017004 cytochrome complex assembly IEP HCCA
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP HCCA
BP GO:0019362 pyridine nucleotide metabolic process IEP HCCA
BP GO:0019363 pyridine nucleotide biosynthetic process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0046496 nicotinamide nucleotide metabolic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0072524 pyridine-containing compound metabolic process IEP HCCA
BP GO:0072525 pyridine-containing compound biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006843 PAP/fibrillin_dom 93 275
No external refs found!