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  5. LOC_Os04g56980.1

LOC_Os04g56980.1 (LOC_Os04g56980)


Aliases : LOC_Os04g56980

Description : no hits & (original description: none)


Gene families : OG0001667 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001667_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g56980.1
Cluster HCCA: Cluster_143

Target Alias Description ECC score Gene Family Method Actions
Adi_g025163 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g106539 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g17027 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g28352 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo121478 No alias No description available 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
InterPro domains Description Start Stop
IPR003121 SWIB_MDM2_domain 262 332
IPR003121 SWIB_MDM2_domain 158 229
No external refs found!