1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os04g56780.1

LOC_Os04g56780.1 (WUS, PGA6, WUS1,...)


Aliases : WUS, PGA6, WUS1, LOC_Os04g56780

Description : transcription factor (WOX)


Gene families : OG0001319 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001319_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g56780.1
Cluster HCCA: Cluster_129

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00122680 WOX1,... RNA biosynthesis.transcriptional activation.HB... 0.05 OrthoFinder output from all 47 species
AT2G01500 PFS2, HOS9, WOX6 Homeodomain-like superfamily protein 0.07 OrthoFinder output from all 47 species
AT2G17950 WUS, PGA6, WUS1 Homeodomain-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT2G28610 WOX3, PRS1, PRS Homeodomain-like superfamily protein 0.05 OrthoFinder output from all 47 species
AT2G33880 STIP, HB-3, WOX9 homeobox-3 0.07 OrthoFinder output from all 47 species
AT3G11260 WOX5 WUSCHEL related homeobox 5 0.02 OrthoFinder output from all 47 species
Adi_g077524 STPL, WOX8 WOX-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.19G069000.1 STPL, WOX8,... WOX-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.1Z064300.1 STPL, WOX8,... not classified & original description: pacid=50628211... 0.09 OrthoFinder output from all 47 species
Ceric.32G042200.1 STPL, WOX8,... WOX-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.32G042300.1 STPL, WOX8,... WOX-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.32G042400.1 STPL, WOX8,... WOX-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
MA_74653g0010 PFS2, HOS9, WOX6 transcription factor (WOX) 0.04 OrthoFinder output from all 47 species
Solyc02g077390.2.1 STIP, HB-3,... transcription factor (WOX) 0.05 OrthoFinder output from all 47 species
Solyc04g078650.4.1 WOX4, Solyc04g078650 transcription factor (WOX) 0.03 OrthoFinder output from all 47 species
Solyc11g072770.2.1 WOX3, PRS1, PRS,... transcription factor (WOX) 0.06 OrthoFinder output from all 47 species
Zm00001e009121_P001 WOX3, PRS1, PRS,... transcription factor (WOX) 0.09 OrthoFinder output from all 47 species
Zm00001e024169_P001 WOX3, PRS1, PRS,... transcription factor (WOX) 0.07 OrthoFinder output from all 47 species
Zm00001e024170_P001 Zm00001e024170 WUSCHEL-related homeobox 3B OS=Zea mays... 0.06 OrthoFinder output from all 47 species
Zm00001e029534_P001 WOX3, PRS1, PRS,... transcription factor (WOX) 0.03 OrthoFinder output from all 47 species
Zm00001e032433_P003 STIP, HB-3,... transcription factor (WOX) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001356 Homeobox_dom 34 94
No external refs found!