Heatmap: Cluster_129 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule
Ovary
Egg cell
Pollen tricellular
Pollen
Sperm
Flower (buds)
Flower
Panicle
Milk grains
Seeds
Seedling
Seedling (12-day-old, DongJin)
Seedling (12-day-old, DongJin, mutant)
Seedling (22-days-old, 22C)
Seedling (22-days-old, 30C)
Meristem
Stems
Callus
Leaf
Leaf (Azucena)
Leaf (Kinandang puti)
Leaf (Pandan wangi)
Leaf (Tadukan)
Leaf (chilling-treatment, 4C, 33h)
Leaf (drought-stress, 1 day)
Leaf (drought-stress, 3 days)
Leaf (drought-stress, 15 min)
Leaf (drought-stress, 45 min)
Leaf (drought-stress, 90 min)
Leaf (drought-stress, 90 min, recovery 15 min)
Leaf (drought-stress, 90 min, recovery 90 min)
Leaf (drought-stress, 90 min, recovery 210 min)
Leaf (heat-stress, 15 min)
Leaf (heat-stress, 150 min)
Leaf (heat-stress, 210 min)
Leaf (heat-stress, 120 min, recovery 15 min)
Leaf (heat-stress, 120 min, recovery 60 min)
Leaf (heat-stress, 120 min, recovery 120 min)
Leaf (dry season, irrigated field)
Leaf (dry season, rainfed field)
Leaf (wet season, irrigated field)
Leaf (wet season, rainfed field)
Root
Root (heading stage)
Root (tillering stage)
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
3.93 4.12 1.1 - - - 0.41 -0.58 -0.94 -2.17 1.1 -6.89 -6.26 -5.62 - - -2.8 -5.9 - -3.85 - -8.13 - -8.86 -3.98 2.11 0.87 - - -2.47 -3.18 -3.09 - - - -5.29 - - - -7.25 -4.09 -7.48 -5.11 -4.89 -5.88 - 0.82 -1.57 -2.65
LOC_Os01g19080.1 (LOC_Os01g19080)
4.77 - - - - - - - - - 4.44 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
3.96 2.44 -2.18 -0.1 -1.12 -1.02 -0.31 -0.06 1.01 0.72 2.22 - - -1.39 - - 3.34 -4.6 2.34 - - - - - - - -3.81 - - -4.69 - - - - - - - - - - - - - -5.59 - - - - -
3.81 4.31 -0.32 - - -0.48 -1.34 -0.49 0.27 - -6.95 -3.54 1.37 -3.31 - - -1.13 - 2.92 -8.92 - -4.45 - - - - - - - - - - - - - - - - - - - - - - - - -1.13 - -
LOC_Os02g48430.1 (LOC_Os02g48430)
4.54 2.65 2.42 -3.66 -2.42 3.13 -1.27 -1.44 1.6 -4.94 -1.94 - - -4.08 - - -1.11 -5.18 -2.86 -4.72 -7.51 -7.29 -6.87 -6.0 -4.49 -4.53 - -5.8 -5.85 -5.76 - -6.14 - - - - -5.71 - - -7.4 -6.94 -6.06 -8.23 -4.02 -6.42 - - - -
LOC_Os02g50900.1 (LOC_Os02g50900)
3.44 3.67 -1.22 - - - 0.5 0.73 1.84 -4.94 -1.76 2.09 1.12 1.27 -1.0 -1.62 0.52 1.06 -2.35 -3.38 -2.63 -1.89 -2.99 -2.05 -2.6 -4.45 -5.31 -2.49 -3.55 -1.75 -1.47 -1.06 -2.65 -2.41 -2.65 -1.41 -3.31 -2.51 -4.06 -5.81 -5.09 -3.77 -3.56 -6.79 -6.85 -3.02 -3.76 -2.63 -1.95
2.88 3.93 0.84 - -6.67 -6.4 1.65 2.02 1.38 0.69 -0.24 -1.3 -1.22 -0.05 - -5.36 -0.03 0.41 -1.85 -3.18 -1.74 -1.6 -2.19 -1.31 -2.45 -6.89 -5.08 -1.21 -1.71 -1.97 -1.86 -2.21 -3.04 -5.47 -2.47 -2.71 -1.99 -1.33 -1.53 -4.59 -5.52 -3.4 -3.29 -0.63 0.11 -0.98 -1.36 -1.51 -2.3
LOC_Os03g25530.1 (LOC_Os03g25530)
3.25 3.03 3.68 -0.07 - - 1.09 2.69 1.57 - 0.83 - - 1.06 - - 0.83 -1.43 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
LOC_Os03g43050.1 (LOC_Os03g43050)
4.16 3.95 - - - - - -2.17 - - -0.55 -0.58 - 0.68 2.16 - -2.36 0.04 - - - - - -1.31 - 0.76 - - - - - 1.13 - - - - - - - - -2.55 - - - - - - - 1.23
LOC_Os03g46110.1 (LOC_Os03g46110)
2.82 2.8 -0.63 -2.18 -4.09 2.67 -5.19 -2.89 4.43 -1.78 0.69 - -4.47 -1.03 - - -3.06 -6.08 1.29 -10.5 - -7.27 - - -1.27 - - - - - - -4.47 - - - - - - - - - - - -5.35 - - -1.67 -3.05 -
LOC_Os03g48880.1 (LOC_Os03g48880)
5.29 2.68 -0.7 -5.67 - 0.74 -1.53 -1.41 -2.33 - -4.82 - - - - - - - - - - -6.91 - -6.68 - -3.74 - - - - - - - - - - - - - - - - - - - - - -3.09 -3.85
LOC_Os03g62900.1 (LOC_Os03g62900)
4.3 3.79 3.62 -5.72 -2.37 -1.97 -0.85 -0.98 -0.01 -6.82 -5.92 - - - - - -1.63 - - -7.38 - - - -6.58 - - - - - - - - - - - - - - - - - - - -7.27 -3.66 -3.04 - - -3.75
1.97 2.22 -0.56 - - -4.37 -3.38 -2.97 0.94 -6.87 -0.62 -4.86 -2.01 -0.57 - - 1.6 -1.77 - - - -6.36 -6.1 -6.41 - - - - - - - - - - - - - - - - - - - -5.26 - -3.29 2.25 3.68 3.9
4.65 2.19 - - - - -3.3 -6.48 1.18 - -3.39 -4.76 -4.22 - - - 4.0 -4.87 -0.46 -10.25 - - - -5.53 - - - - - - - - - - - - - - - - - - - - - - - - -
LOC_Os05g06560.1 (LOC_Os05g06560)
3.78 0.98 -2.38 -5.85 - -5.31 -4.39 -3.12 2.98 2.16 2.76 -3.42 -3.71 -3.07 - - 3.1 -2.36 - -6.99 -7.33 -4.98 -4.5 -5.56 - - -4.72 - - - - -3.41 - - - - - - - -8.25 -8.43 -5.4 -4.97 -4.1 -3.93 -4.08 1.61 -0.04 -2.43
LOC_Os05g24510.1 (LOC_Os05g24510)
3.76 2.25 - 3.36 3.97 - - 0.04 - - -2.32 - - - - - - -1.13 - 0.62 - - - - - - - - - - - - - - - - - - - - 0.05 - - -1.04 - - - - -
LOC_Os05g49340.1 (LOC_Os05g49340)
3.8 3.88 -0.41 - - - 0.13 -0.01 2.33 - 0.13 - - - - - -1.49 -4.39 - - - - - - - - - - - - - - - - - - - - - - - - - - - - -0.34 2.83 1.66
LOC_Os05g51270.1 (LOC_Os05g51270)
4.44 4.18 2.49 - - - - - -0.02 - -4.75 - - - - - 0.97 - - - - - -0.75 - - - - - - - - - - - - - - - - - - - - - - - - - -
LOC_Os06g11010.1 (LOC_Os06g11010)
5.36 2.82 -4.82 - - - -3.15 -3.79 -1.6 - -4.01 -7.01 -5.55 - - - -2.93 -7.04 - -6.94 - - -8.92 -7.14 -4.16 - - - - - - -5.77 - - - - - - - -8.53 - - - - -5.69 -4.63 - - -
LOC_Os06g11610.1 (LOC_Os06g11610)
2.95 2.07 1.07 -6.97 -7.62 -4.18 -0.98 -1.19 1.08 2.01 1.91 -3.58 -1.28 -0.06 -2.76 -2.15 2.51 -1.23 1.94 -2.8 -4.83 -3.98 -4.94 -4.52 0.93 0.6 -4.89 -4.18 -5.61 -5.49 -4.74 -4.14 -4.55 0.95 -4.25 -3.66 -4.01 -6.14 -7.09 -4.57 -3.45 -4.37 -3.74 -1.24 -4.03 -3.35 0.4 0.76 1.17
3.1 4.35 0.39 -9.58 -8.29 -6.12 0.96 0.64 1.92 -5.35 -0.75 -4.07 -0.55 0.22 -6.25 - 2.94 -1.41 -3.52 -3.24 -5.11 -6.33 -5.17 -6.22 -5.13 - -6.55 -6.14 - -5.32 -6.65 -8.29 -6.33 - - -4.39 -4.35 -5.6 - -5.57 -6.14 -5.92 -6.08 -3.77 -6.23 -4.41 -3.14 -5.46 -7.76
LOC_Os06g42320.1 (LOC_Os06g42320)
2.76 5.13 - - - - - - 2.86 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
LOC_Os06g46830.1 (LOC_Os06g46830)
4.43 3.86 - - - - - - - - -2.21 - - 0.73 - - -1.82 - - - - - - - - - - - - 1.79 - - - - - - - - - -1.92 - - - - - - 2.26 - 1.16
LOC_Os07g05060.1 (LOC_Os07g05060)
2.09 3.73 0.38 -5.95 -4.33 -5.06 2.76 2.76 2.96 0.82 0.5 -5.23 - - - - 2.1 -7.26 0.24 - - - - -5.83 - - - - - - - -4.52 - - - - - - - - - - - - - - - - -
LOC_Os07g09270.1 (LOC_Os07g09270)
3.62 4.53 -2.19 - - - 1.41 0.89 -0.6 - 0.51 0.54 -1.19 -0.46 - - -1.05 - - - - -2.84 - -0.18 - -0.37 - - - - - -0.61 - - - - - 0.24 - -3.66 - - - - - - - - -
LOC_Os07g33380.1 (LOC_Os07g33380)
4.9 2.64 -1.05 -2.48 0.14 - -1.27 -1.87 1.75 -5.34 -0.91 - -2.8 - - -0.72 0.56 -2.59 0.97 -1.67 - -5.71 - -4.08 -0.59 -2.3 - - - - - - - - - - - - - - - -3.4 -4.47 -2.73 -1.29 -2.53 - - -
LOC_Os07g40170.1 (LOC_Os07g40170)
4.62 3.7 -2.18 -1.45 - - -2.79 -4.37 0.67 - -4.48 -3.3 - - - - 1.96 -5.24 1.7 - -4.9 - - - - - - - - -0.91 - - - -0.63 - - - - - - - - - -2.74 -1.4 - - - -
LOC_Os07g45370.1 (LOC_Os07g45370)
2.89 1.44 2.05 -0.97 -0.64 1.12 0.65 -0.16 -0.95 1.13 1.31 0.26 -0.92 -1.02 - -0.97 0.96 -0.78 - -1.6 -1.5 -3.7 -1.61 -3.18 -1.94 -2.37 -2.74 -0.76 -0.3 -1.66 -0.67 -0.89 -1.4 -1.08 -0.68 -0.97 -0.38 -1.08 -0.61 -2.89 -1.49 -0.95 -0.88 0.41 0.83 -0.55 0.26 0.25 1.12
LOC_Os08g05080.1 (LOC_Os08g05080)
4.92 2.92 1.22 - -6.17 -3.0 -0.71 -1.13 0.15 -5.63 -2.6 -5.55 - - - - 2.59 -8.47 - -4.58 -8.99 -8.41 - - - -5.75 - - - - - -4.64 - - - - - - - -7.56 -7.03 -7.21 - -5.54 -3.48 -2.53 - - -
LOC_Os08g16030.1 (LOC_Os08g16030)
2.24 2.62 0.04 -7.17 -6.39 - -1.03 -0.66 1.36 -3.55 -0.74 -3.24 -0.33 1.04 - -3.98 2.02 -0.34 2.05 -3.46 -4.95 -5.2 -3.28 -5.13 -2.84 - - -5.13 -4.55 - - - -3.98 - - -5.15 - -3.47 -5.3 -4.75 -3.06 -3.99 -3.27 -5.15 -2.45 1.45 2.18 3.16 1.71
LOC_Os08g32370.1 (LOC_Os08g32370)
3.58 3.06 -2.23 -0.23 - -0.03 1.15 0.69 3.44 0.5 0.89 -5.47 -4.94 -3.12 - - 2.57 -4.3 0.41 -8.79 -7.48 - -7.48 -7.25 - -2.65 - - - - - -3.94 -3.98 - - - - - - -7.41 - - - -8.32 -1.85 -0.72 - - -
3.15 3.54 -1.0 -5.1 -5.14 1.35 0.13 -0.14 1.97 -3.26 0.09 -4.55 1.1 1.33 - -3.63 1.44 0.8 -2.85 -5.13 -4.21 -4.42 -4.34 -5.32 -2.53 -6.05 - - -3.79 -2.98 -2.55 -2.52 -3.72 -5.36 -3.5 -3.79 -3.8 -3.87 -4.36 -9.31 -7.29 -8.52 -8.45 -3.3 -3.32 -1.22 1.03 1.8 0.49
LOC_Os08g37730.1 (LOC_Os08g37730)
2.79 4.05 -2.99 -8.96 - - 0.23 0.28 2.86 -0.8 -0.18 -5.25 -1.52 -0.64 -3.8 -4.74 1.77 -1.18 2.96 -2.41 -6.61 -4.14 -5.54 -4.32 -1.2 -4.36 -3.5 -4.41 - -6.93 -6.84 -8.83 -6.67 -5.39 -5.16 -6.9 -5.22 -4.14 -7.09 -6.69 -5.48 -5.09 -4.11 -2.75 -3.91 -3.58 -4.79 - -
LOC_Os08g44020.2 (LOC_Os08g44020)
2.07 3.69 -0.66 -4.59 -5.7 -1.81 1.28 1.41 0.91 -2.73 -2.01 -0.95 -0.77 -1.23 -1.16 -1.07 2.27 -0.04 2.33 -2.64 -1.12 -1.03 -1.56 -1.0 -3.61 -2.9 -1.89 -0.93 -1.2 -0.74 -1.21 -0.9 -1.47 -2.03 -0.91 -0.53 -0.5 -0.55 -0.84 -3.55 -2.9 -2.62 -1.7 -2.6 -3.66 -4.11 -1.47 -3.77 -3.5
LOC_Os08g44080.1 (LOC_Os08g44080)
2.61 3.48 -0.26 - - - - - 0.33 -2.89 -2.38 - - - - - 0.36 -0.63 3.42 -4.95 - -2.15 - -2.66 3.78 0.28 - - - - - - - - - - - - - - - - - - 0.36 - - - -
LOC_Os09g26520.1 (LOC_Os09g26520)
4.15 1.96 -2.6 - - - - - 0.79 - -6.71 - - - - - 4.62 - - - - - - -4.65 - - - - - -1.44 - -2.34 - - - - - - - -3.16 -3.63 - - - - - - - -
LOC_Os09g29360.1 (LOC_Os09g29360)
2.15 2.72 -3.0 -8.35 - -6.94 -0.21 -0.97 1.37 -1.22 0.86 -2.12 -0.54 1.56 - - 2.05 -0.33 2.23 -4.57 -3.58 -2.45 -3.68 -2.63 -2.74 -6.42 -6.49 -2.95 -2.48 -4.75 -3.95 -4.19 -3.91 -4.22 -4.11 -3.53 -3.75 - -4.8 -5.72 -5.42 -4.76 -4.51 -3.43 -3.09 0.06 2.73 2.58 1.36
LOC_Os10g08950.1 (LOC_Os10g08950)
3.28 3.27 -3.1 2.9 -2.38 3.27 -1.37 -2.55 -3.72 0.93 1.88 - -2.74 -2.02 - - 1.75 -2.99 - -2.93 - -7.14 - -5.09 -0.22 - - -5.96 - - - - - - - - - - - -3.99 -4.37 -3.55 - -2.9 - -2.31 - -1.98 -2.02
LOC_Os11g09770.1 (LOC_Os11g09770)
4.39 3.38 -1.11 -4.33 -1.86 -0.33 2.77 2.26 1.65 0.04 -2.08 - - -5.1 - - -6.53 - - -5.49 - - - - - - - - - - - - - - - - - - - - - - - -3.83 - - - - -
LOC_Os11g10880.1 (LOC_Os11g10880)
2.45 2.23 - - - - 0.84 2.56 4.08 - -2.98 0.13 0.74 - - 2.88 - -0.43 - - - - - - - - - - - - - 0.83 - - - - - - - - -1.0 - -0.0 - - - - - -
LOC_Os11g10890.1 (LOC_Os11g10890)
3.1 3.56 - - - 1.57 - - 4.66 - -2.42 - - - - - - -1.9 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
LOC_Os11g28860.1 (LOC_Os11g28860)
2.39 2.53 0.54 - 0.0 0.39 - - - - -0.81 - - 0.35 1.89 1.87 2.02 - 3.58 -2.26 - - - - 3.14 - - - - - - - - - - - - - - - - - - - - - - - -
3.55 2.97 -1.93 - - - -1.65 -2.07 1.47 -6.78 -1.56 -6.03 1.2 1.7 -1.73 -2.2 2.83 -0.57 -2.25 0.48 -1.29 -1.21 -1.5 -1.24 0.63 0.11 -1.68 -1.05 -1.45 -2.36 -2.26 -2.35 -1.33 -0.92 -1.25 -1.51 -1.42 -1.49 -1.78 -2.14 -2.19 -1.92 -1.99 -2.44 - -4.26 -4.28 -5.23 -4.75

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.