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  5. LOC_Os04g56300.1

LOC_Os04g56300.1 (LOC_Os04g56300)


Aliases : LOC_Os04g56300

Description : component ADA1 of SAGA transcription co-activator complex


Gene families : OG0001506 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001506_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g56300.1

Target Alias Description ECC score Gene Family Method Actions
Als_g26308 No alias component *(ADA1) of SAGA transcription co-activator... 0.02 OrthoFinder output from all 47 species
Azfi_s0045.g029796 No alias component *(ADA1) of SAGA transcription co-activator... 0.05 OrthoFinder output from all 47 species
Ceric.24G023100.1 Ceric.24G023100 component *(ADA1) of SAGA transcription co-activator... 0.02 OrthoFinder output from all 47 species
Ceric.25G027300.1 Ceric.25G027300 component *(ADA1) of SAGA transcription co-activator... 0.03 OrthoFinder output from all 47 species
Dde_g08166 No alias component *(ADA1) of SAGA transcription co-activator... 0.02 OrthoFinder output from all 47 species
GSVIVT01035521001 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.03 OrthoFinder output from all 47 species
GSVIVT01037861001 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.04 OrthoFinder output from all 47 species
LOC_Os12g39090.2 LOC_Os12g39090 component ADA1 of SAGA transcription co-activator complex 0.05 OrthoFinder output from all 47 species
Len_g19584 No alias component *(ADA1) of SAGA transcription co-activator... 0.02 OrthoFinder output from all 47 species
MA_7243g0030 No alias component ADA1 of SAGA transcription co-activator complex 0.02 OrthoFinder output from all 47 species
Pir_g40490 No alias component *(ADA1) of SAGA transcription co-activator... 0.02 OrthoFinder output from all 47 species
Pir_g47730 No alias component *(ADA1) of SAGA transcription co-activator... 0.05 OrthoFinder output from all 47 species
Pir_g61284 No alias component *(ADA1) of SAGA transcription co-activator... 0.02 OrthoFinder output from all 47 species
Sam_g18096 No alias component *(ADA1) of SAGA transcription co-activator... 0.02 OrthoFinder output from all 47 species
Solyc01g107210.4.1 Solyc01g107210 component ADA1 of SAGA transcription co-activator complex 0.03 OrthoFinder output from all 47 species
Zm00001e003039_P001 Zm00001e003039 component ADA1 of SAGA transcription co-activator complex 0.03 OrthoFinder output from all 47 species
Zm00001e005767_P001 Zm00001e005767 component ADA1 of SAGA transcription co-activator complex 0.04 OrthoFinder output from all 47 species
Zm00001e006681_P001 Zm00001e006681 component ADA1 of SAGA transcription co-activator complex 0.06 OrthoFinder output from all 47 species
Zm00001e011984_P001 Zm00001e011984 component ADA1 of SAGA transcription co-activator complex 0.05 OrthoFinder output from all 47 species
Zm00001e041823_P001 Zm00001e041823 component ADA1 of SAGA transcription co-activator complex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0070461 SAGA-type complex IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR024738 Hfi1/Tada1 32 338
No external refs found!