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  5. LOC_Os04g55940.1

LOC_Os04g55940.1 (atcax2, CAX2, LOC_Os04g55940)


Aliases : atcax2, CAX2, LOC_Os04g55940

Description : cation antiporter (CAX)


Gene families : OG0001218 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001218_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g55940.1

Target Alias Description ECC score Gene Family Method Actions
AT3G13320 atcax2, CAX2 cation exchanger 2 0.03 OrthoFinder output from all 47 species
Adi_g024473 atcax2, CAX2 cation antiporter *(CAX) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.1Z100600.1 atcax2, CAX2,... cation antiporter *(CAX) & original description:... 0.02 OrthoFinder output from all 47 species
Len_g11144 ATCAX5, CAX5 cation antiporter *(CAX) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g01073 atcax2, CAX2 cation antiporter *(CAX) & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g04509 ATCAX5, CAX5 cation antiporter *(CAX) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc12g011070.3.1 ATCAX5, CAX5,... cation antiporter (CAX) 0.03 OrthoFinder output from all 47 species
Solyc12g055750.3.1 ATCAX5, CAX5,... cation antiporter (CAX) 0.03 OrthoFinder output from all 47 species
Zm00001e006701_P002 atcax2, CAX2,... cation antiporter (CAX) 0.04 OrthoFinder output from all 47 species
Zm00001e038005_P001 atcax2, CAX2,... cation antiporter (CAX) 0.03 OrthoFinder output from all 47 species
Zm00001e041807_P001 atcax2, CAX2,... cation antiporter (CAX) 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004559 alpha-mannosidase activity IEP HCCA
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP HCCA
MF GO:0005484 SNAP receptor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP HCCA
BP GO:0008202 steroid metabolic process IEP HCCA
MF GO:0015923 mannosidase activity IEP HCCA
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP HCCA
BP GO:0016125 sterol metabolic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016863 intramolecular oxidoreductase activity, transposing C=C bonds IEP HCCA
MF GO:0030674 protein-macromolecule adaptor activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0047750 cholestenol delta-isomerase activity IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
MF GO:0060090 molecular adaptor activity IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR004837 NaCa_Exmemb 75 230
IPR004837 NaCa_Exmemb 264 404
No external refs found!