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  5. LOC_Os04g54810.1

LOC_Os04g54810.1 (XYL4, ATBXL4, LOC_Os04g54810)


Aliases : XYL4, ATBXL4, LOC_Os04g54810

Description : bifunctional alpha-L-arabinofuranosidase and beta-D-xylosidase (BXL)


Gene families : OG0001022 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001022_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g54810.1
Cluster HCCA: Cluster_171

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00188970 evm_27.TU.AmTr_v1... Cell wall.pectin.rhamnogalacturonan I.modification and... 0.03 OrthoFinder output from all 47 species
AMTR_s00010p00246460 XYL4, ATBXL4,... Cell wall.pectin.rhamnogalacturonan I.modification and... 0.04 OrthoFinder output from all 47 species
AMTR_s00068p00088730 XYL4, ATBXL4,... Cell wall.pectin.rhamnogalacturonan I.modification and... 0.02 OrthoFinder output from all 47 species
AMTR_s00125p00113140 evm_27.TU.AmTr_v1... Cell wall.pectin.rhamnogalacturonan I.modification and... 0.03 OrthoFinder output from all 47 species
AT1G78060 No alias Glycosyl hydrolase family protein 0.03 OrthoFinder output from all 47 species
AT3G19620 No alias Glycosyl hydrolase family protein 0.03 OrthoFinder output from all 47 species
Aev_g37060 XYL4, ATBXL4 EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g25839 No alias EC_3.2 glycosylase & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g03832 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene53707.t1 Aspi01Gene53707 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05930 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.31G017600.1 Ceric.31G017600 EC_3.2 glycosylase & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.31G017800.1 Ceric.31G017800 EC_3.2 glycosylase & original description:... 0.06 OrthoFinder output from all 47 species
Dac_g20398 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g25402 XYL4, ATBXL4 EC_3.2 glycosylase & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01009003001 No alias Cell wall.pectin.rhamnogalacturonan I.modification and... 0.05 OrthoFinder output from all 47 species
GSVIVT01017658001 BXL3, BX3, XYL3,... Cell wall.pectin.rhamnogalacturonan I.modification and... 0.03 OrthoFinder output from all 47 species
GSVIVT01017659001 No alias Cell wall.pectin.rhamnogalacturonan I.modification and... 0.03 OrthoFinder output from all 47 species
GSVIVT01017660001 No alias Cell wall.pectin.rhamnogalacturonan I.modification and... 0.01 OrthoFinder output from all 47 species
GSVIVT01028104001 ATBXL2, BXL2 Cell wall.pectin.rhamnogalacturonan I.modification and... 0.04 OrthoFinder output from all 47 species
Gb_26639 No alias bifunctional alpha-L-arabinofuranosidase and... 0.03 OrthoFinder output from all 47 species
Gb_32463 XYL4, ATBXL4 bifunctional alpha-L-arabinofuranosidase and... 0.02 OrthoFinder output from all 47 species
LOC_Os02g51620.1 LOC_Os02g51620 bifunctional alpha-L-arabinofuranosidase and... 0.04 OrthoFinder output from all 47 species
LOC_Os11g44950.2 ATBXL2, BXL2,... bifunctional alpha-L-arabinofuranosidase and... 0.05 OrthoFinder output from all 47 species
Len_g05441 No alias EC_3.2 glycosylase & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g29235 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
MA_102349g0010 XYL4, ATBXL4 bifunctional alpha-L-arabinofuranosidase and... 0.03 OrthoFinder output from all 47 species
MA_10430067g0010 XYL4, ATBXL4 bifunctional alpha-L-arabinofuranosidase and... 0.03 OrthoFinder output from all 47 species
MA_10436568g0020 No alias bifunctional alpha-L-arabinofuranosidase and... 0.03 OrthoFinder output from all 47 species
MA_791061g0010 No alias bifunctional alpha-L-arabinofuranosidase and... 0.06 OrthoFinder output from all 47 species
Mp5g02880.1 XYL4, ATBXL4 bifunctional alpha-L-arabinofuranosidase and... 0.03 OrthoFinder output from all 47 species
Msp_g13827 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g19793 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g25216 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g26394 BXL3, BX3, XYL3,... EC_3.2 glycosylase & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g27870 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g36714 XYL4, ATBXL4 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g43289 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g06957 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g10735 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g12561 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g24375 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Smo112087 No alias Cell wall.pectin.rhamnogalacturonan I.modification and... 0.02 OrthoFinder output from all 47 species
Solyc01g079570.3.1 ATBXL2, BXL2,... bifunctional alpha-L-arabinofuranosidase and... 0.04 OrthoFinder output from all 47 species
Solyc04g072850.4.1 Solyc04g072850 bifunctional alpha-L-arabinofuranosidase and... 0.09 OrthoFinder output from all 47 species
Solyc04g072860.3.1 Solyc04g072860 bifunctional alpha-L-arabinofuranosidase and... 0.04 OrthoFinder output from all 47 species
Tin_g08893 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e008876_P002 Zm00001e008876 bifunctional alpha-L-arabinofuranosidase and... 0.02 OrthoFinder output from all 47 species
Zm00001e015868_P001 Zm00001e015868 bifunctional alpha-L-arabinofuranosidase and... 0.1 OrthoFinder output from all 47 species
Zm00001e041753_P002 XYL4, ATBXL4,... bifunctional alpha-L-arabinofuranosidase and... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP HCCA
BP GO:0001932 regulation of protein phosphorylation IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP HCCA
MF GO:0015020 glucuronosyltransferase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
BP GO:0019220 regulation of phosphate metabolic process IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0019900 kinase binding IEP HCCA
MF GO:0019901 protein kinase binding IEP HCCA
BP GO:0031399 regulation of protein modification process IEP HCCA
BP GO:0042325 regulation of phosphorylation IEP HCCA
BP GO:0043549 regulation of kinase activity IEP HCCA
BP GO:0045859 regulation of protein kinase activity IEP HCCA
CC GO:0046658 obsolete anchored component of plasma membrane IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0051174 regulation of phosphorus metabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051338 regulation of transferase activity IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
BP GO:0071900 regulation of protein serine/threonine kinase activity IEP HCCA
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP HCCA
InterPro domains Description Start Stop
IPR001764 Glyco_hydro_3_N 112 353
IPR026891 Fn3-like 690 756
IPR002772 Glyco_hydro_3_C 399 629
No external refs found!