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  5. LOC_Os04g48400.1

LOC_Os04g48400.1 (LOC_Os04g48400)


Aliases : LOC_Os04g48400

Description : Protein HOTHEAD OS=Arabidopsis thaliana (sp|q9s746|hth_arath : 589.0)


Gene families : OG0000755 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000755_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g48400.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00263600 evm_27.TU.AmTr_v1... (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00028p00205540 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00028p00206870 evm_27.TU.AmTr_v1... (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00036p00060130 EDA17, HTH,... Cell wall.cutin and suberin.cuticular lipid... 0.02 OrthoFinder output from all 47 species
AMTR_s00069p00163110 evm_27.TU.AmTr_v1... Protein HOTHEAD OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
AT1G12570 No alias Glucose-methanol-choline (GMC) oxidoreductase family protein 0.11 OrthoFinder output from all 47 species
AT1G72970 EDA17, HTH Glucose-methanol-choline (GMC) oxidoreductase family protein 0.05 OrthoFinder output from all 47 species
AT1G73050 No alias Glucose-methanol-choline (GMC) oxidoreductase family protein 0.02 OrthoFinder output from all 47 species
AT3G56060 No alias Glucose-methanol-choline (GMC) oxidoreductase family protein 0.03 OrthoFinder output from all 47 species
AT5G51950 No alias Glucose-methanol-choline (GMC) oxidoreductase family protein 0.09 OrthoFinder output from all 47 species
Adi_g055034 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g70207 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s1527.g104149 No alias not classified & original description: CDS=163-1728 0.05 OrthoFinder output from all 47 species
Azfi_s2046.g108872 No alias not classified & original description: CDS=162-1706 0.06 OrthoFinder output from all 47 species
Ceric.10G018600.1 Ceric.10G018600 not classified & original description: pacid=50613331... 0.07 OrthoFinder output from all 47 species
Dcu_g44207 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g28809 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
GSVIVT01010648001 No alias Protein HOTHEAD OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01010650001 No alias Protein HOTHEAD OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
GSVIVT01013124001 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01016856001 EDA17, HTH Cell wall.cutin and suberin.cuticular lipid... 0.04 OrthoFinder output from all 47 species
GSVIVT01019871001 No alias Protein HOTHEAD OS=Arabidopsis thaliana 0.08 OrthoFinder output from all 47 species
Gb_00808 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_12981 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_16610 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Gb_19558 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_27931 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Gb_28422 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_29960 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
Gb_30675 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_31766 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Gb_32365 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Gb_33524 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Gb_37786 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_38452 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.08 OrthoFinder output from all 47 species
Gb_39926 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_39927 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_39928 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_41784 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
LOC_Os08g31030.1 EDA17, HTH,... omega-hydroxy fatty acyl dehydrogenase 0.03 OrthoFinder output from all 47 species
LOC_Os10g38050.1 LOC_Os10g38050 Protein HOTHEAD OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
Len_g59481 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10432967g0010 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_10433135g0010 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_10433135g0020 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10434331g0010 EDA17, HTH Protein HOTHEAD OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_10434495g0020 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_115358g0010 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_7181516g0010 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Msp_g43877 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g16242 EDA17, HTH not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g41402 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g45398 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g52283 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Smo108291 No alias Protein HOTHEAD OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Smo112603 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Smo153538 No alias Protein HOTHEAD OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Smo235799 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Smo405960 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Smo407760 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Smo422534 No alias Protein HOTHEAD OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Smo427468 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Smo429523 No alias Protein HOTHEAD OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Smo90809 No alias Protein HOTHEAD OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc06g035580.3.1 Solyc06g035580 Protein HOTHEAD OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc06g062600.3.1 EDA17, HTH,... omega-hydroxy fatty acyl dehydrogenase 0.02 OrthoFinder output from all 47 species
Solyc08g080190.4.1 Solyc08g080190 Protein HOTHEAD OS=Arabidopsis thaliana... 0.09 OrthoFinder output from all 47 species
Spa_g05899 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g44741 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e002156_P001 Zm00001e002156 Protein HOTHEAD OS=Arabidopsis thaliana... 0.13 OrthoFinder output from all 47 species
Zm00001e004200_P002 EDA17, HTH,... omega-hydroxy fatty acyl dehydrogenase 0.07 OrthoFinder output from all 47 species
Zm00001e007199_P001 Zm00001e007199 Protein HOTHEAD OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Zm00001e015434_P001 Zm00001e015434 Protein HOTHEAD OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEA Interproscan
MF GO:0050660 flavin adenine dinucleotide binding IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006417 regulation of translation IEP HCCA
BP GO:0009890 negative regulation of biosynthetic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010608 post-transcriptional regulation of gene expression IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
BP GO:0017148 negative regulation of translation IEP HCCA
MF GO:0030597 RNA glycosylase activity IEP HCCA
MF GO:0030598 rRNA N-glycosylase activity IEP HCCA
BP GO:0031324 negative regulation of cellular metabolic process IEP HCCA
BP GO:0031327 negative regulation of cellular biosynthetic process IEP HCCA
BP GO:0034248 regulation of amide metabolic process IEP HCCA
BP GO:0034249 negative regulation of amide metabolic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051248 negative regulation of protein metabolic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140102 catalytic activity, acting on a rRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP HCCA
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR007867 GMC_OxRtase_C 425 570
IPR000172 GMC_OxRdtase_N 49 322
No external refs found!