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LOC_Os04g46892.1 (LOC_Os04g46892)


Aliases : LOC_Os04g46892

Description : BEACH domain-containing protein C2 OS=Arabidopsis thaliana (sp|f4ig73|bchc2_arath : 416.0)


Gene families : OG0005532 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005532_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g46892.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00069p00185250 evm_27.TU.AmTr_v1... BEACH domain-containing protein C2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Adi_g107386 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g02732 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g08158 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g11295 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g03525 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Mp6g16270.1 No alias BEACH domain-containing protein C2 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Msp_g13656 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g08434 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g06934 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g08777 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo60006 No alias BEACH domain-containing protein C2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc01g094050.1.1 Solyc01g094050 BEACH domain-containing protein C2 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc01g094060.4.1 Solyc01g094060 BEACH domain-containing protein C2 OS=Arabidopsis... 0.07 OrthoFinder output from all 47 species
Zm00001e007294_P001 Zm00001e007294 BEACH domain-containing protein C2 OS=Arabidopsis... 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 192 219
IPR001680 WD40_repeat 117 149
No external refs found!