LOC_Os04g45650.2 (GATA5, LOC_Os04g45650)

Aliases : GATA5, LOC_Os04g45650

Description : transcription factor (GATA)

Gene families : OG0000100 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000100_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os04g45650.2
Cluster	HCCA: Cluster_81

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00004p00074220	GATA4,...	RNA biosynthesis.transcriptional activation.C2C2...	0.03	OrthoFinder output from all 47 species
AMTR_s00025p00250380	GATA23,...	RNA biosynthesis.transcriptional activation.C2C2...	0.03	OrthoFinder output from all 47 species
AT4G16141	No alias	GATA type zinc finger transcription factor family protein	0.02	OrthoFinder output from all 47 species
AT5G26930	GATA23	GATA transcription factor 23	0.03	OrthoFinder output from all 47 species
AT5G66320	GATA5	GATA transcription factor 5	0.02	OrthoFinder output from all 47 species
Adi_g057963	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g058313	GATA4	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g098113	No alias	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g03153	GATA5	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g17574	GATA9	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g13178	GATA12	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g13992	GATA22, CGA1, GNL	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Als_g09936	GNC, GATA21	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Als_g09937	GNC, GATA21	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Als_g11283	GATA4	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Als_g48899	GATA4	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Als_g52135	GATA5	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g05872	GATA22, CGA1, GNL	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene30025.t1	GATA5, Aspi01Gene30025	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene33196.t1	GATA12, Aspi01Gene33196	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene60517.t1	GATA20, Aspi01Gene60517	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene64140.t1	GATA4, Aspi01Gene64140	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene67105.t1	GATA5, Aspi01Gene67105	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene69106.t1	GATA4, Aspi01Gene69106	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0078.g038241	GATA4	transcription factor *(A/B-GATA) & original description:...	0.03	OrthoFinder output from all 47 species
Cba_g04557	GATA9	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g05826	GATA9	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.07G063400.1	GATA12, Ceric.07G063400	transcription factor *(A/B-GATA) & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.17G054000.1	GATA5, Ceric.17G054000	transcription factor *(A/B-GATA) & original description:...	0.02	OrthoFinder output from all 47 species
Ceric.18G043900.1	GATA15, Ceric.18G043900	transcription factor *(A/B-GATA) & original description:...	0.04	OrthoFinder output from all 47 species
Ceric.34G071700.1	GATA5, Ceric.34G071700	transcription factor *(A/B-GATA) & original description:...	0.04	OrthoFinder output from all 47 species
Ceric.35G025300.1	GATA20, Ceric.35G025300	transcription factor *(A/B-GATA) & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.36G061000.1	GATA12, Ceric.36G061000	transcription factor *(A/B-GATA) & original description:...	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00001094.21	GATA7	RNA biosynthesis.transcriptional activation.C2C2...	0.01	OrthoFinder output from all 47 species
Dac_g10781	GATA9	transcription factor *(A/B-GATA) & original description: none	0.04	OrthoFinder output from all 47 species
Dcu_g01502	GATA9	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g04522	GATA9	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g06887	GATA2	transcription factor *(A/B-GATA) & original description: none	0.04	OrthoFinder output from all 47 species
Dcu_g07436	GATA9	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g06602	GATA9	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g06867	GATA9	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g08197	GATA1	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g08339	GATA12	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g22706	GATA4	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01017011001	GATA12	RNA biosynthesis.transcriptional activation.C2C2...	0.05	OrthoFinder output from all 47 species
GSVIVT01018180001	GATA4	RNA biosynthesis.transcriptional activation.C2C2...	0.04	OrthoFinder output from all 47 species
GSVIVT01033385001	GATA9	RNA biosynthesis.transcriptional activation.C2C2...	0.03	OrthoFinder output from all 47 species
GSVIVT01035614001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.06	OrthoFinder output from all 47 species
Gb_13387	GATA9	transcription factor (GATA)	0.02	OrthoFinder output from all 47 species
Gb_25568	GATA20	transcription factor (GATA)	0.02	OrthoFinder output from all 47 species
Len_g12686	GNC, GATA21	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g03183	GATA4	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
MA_10436047g0010	GATA17	transcription factor (GATA)	0.02	OrthoFinder output from all 47 species
Msp_g37564	GATA5	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g02094	GATA9	transcription factor *(A/B-GATA) & original description: none	0.04	OrthoFinder output from all 47 species
Nbi_g34157	GATA5	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g26719	GATA9	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g14533	GATA9	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g09627	GATA9	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000079	GATA9	transcription factor *(A/B-GATA) & original description:...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0063.g015681	GATA12	transcription factor *(A/B-GATA) & original description:...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0072.g016909	GATA9	transcription factor *(A/B-GATA) & original description:...	0.05	OrthoFinder output from all 47 species
Sacu_v1.1_s0146.g023073	GATA9	transcription factor *(A/B-GATA) & original description:...	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0192.g025334	GATA12	transcription factor *(A/B-GATA) & original description:...	0.03	OrthoFinder output from all 47 species
Sam_g08124	No alias	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Solyc02g085190.2.1	HAN, MNP,...	transcription factor (GATA)	0.03	OrthoFinder output from all 47 species
Solyc03g033660.4.1	GATA5, Solyc03g033660	transcription factor (GATA)	0.04	OrthoFinder output from all 47 species
Solyc05g056120.3.1	BME3-ZF, BME3,...	transcription factor (GATA)	0.04	OrthoFinder output from all 47 species
Spa_g12632	GATA12	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g29134	GATA9	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g30606	GATA9	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e002326_P001	GATA4, Zm00001e002326	transcription factor (GATA)	0.02	OrthoFinder output from all 47 species
Zm00001e005940_P001	GATA4, Zm00001e005940	transcription factor (GATA)	0.04	OrthoFinder output from all 47 species
Zm00001e006272_P001	GATA17, Zm00001e006272	transcription factor (GATA)	0.05	OrthoFinder output from all 47 species
Zm00001e007391_P002	GATA5, Zm00001e007391	transcription factor (GATA)	0.04	OrthoFinder output from all 47 species
Zm00001e015260_P001	GATA5, Zm00001e015260	transcription factor (GATA)	0.11	OrthoFinder output from all 47 species
Zm00001e016165_P001	BME3-ZF, BME3,...	transcription factor (GATA)	0.03	OrthoFinder output from all 47 species
Zm00001e018438_P001	GATA4, Zm00001e018438	transcription factor (GATA)	0.03	OrthoFinder output from all 47 species
Zm00001e023650_P003	BME3-ZF, BME3,...	transcription factor (GATA)	0.03	OrthoFinder output from all 47 species
Zm00001e026256_P001	GATA23, Zm00001e026256	transcription factor (GATA)	0.02	OrthoFinder output from all 47 species
Zm00001e039467_P001	GATA14, Zm00001e039467	transcription factor (GATA)	0.03	OrthoFinder output from all 47 species
Zm00001e041332_P001	GATA5, Zm00001e041332	transcription factor (GATA)	0.07	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0008380	RNA splicing	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000679	Znf_GATA	291	325

External Links

No external refs found!

LOC_Os04g45650.2 (GATA5, LOC_Os04g45650)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation