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  5. LOC_Os04g45590.1

LOC_Os04g45590.1 (LOC_Os04g45590)


Aliases : LOC_Os04g45590

Description : no hits & (original description: none)


Gene families : OG0001159 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001159_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g45590.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00081p00168190 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00182p00048530 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
Als_g32679 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g58735 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene71508.t1 Aspi01Gene71508 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g25914 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_193904g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_34359g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_9005842g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ore_g33782 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0012.g005398 No alias not classified & original description: CDS=1-540 0.02 OrthoFinder output from all 47 species
Solyc12g006640.2.1 Solyc12g006640 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g30154 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g53908 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e026712_P002 Zm00001e026712 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004360 Glyas_Fos-R_dOase_dom 18 142
No external refs found!