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  5. LOC_Os04g42840.1

LOC_Os04g42840.1 (ATCLASP, CLASP, LOC_Os04g42840)


Aliases : ATCLASP, CLASP, LOC_Os04g42840

Description : microtubule orientation regulator (CLASP)


Gene families : OG0001377 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001377_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g42840.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00039p00148640 ATCLASP, CLASP,... Cell cycle.cytokinesis.preprophase microtubule... 0.05 OrthoFinder output from all 47 species
Adi_g024485 ATCLASP, CLASP not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g086375 ATCLASP, CLASP microtubule orientation regulator *(CLASP) & original... 0.04 OrthoFinder output from all 47 species
Als_g32923 ATCLASP, CLASP microtubule orientation regulator *(CLASP) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene03826.t1 ATCLASP, CLASP,... microtubule orientation regulator *(CLASP) & original... 0.02 OrthoFinder output from all 47 species
Ceric.23G060800.1 ATCLASP, CLASP,... microtubule orientation regulator *(CLASP) & original... 0.04 OrthoFinder output from all 47 species
Dcu_g08319 ATCLASP, CLASP microtubule orientation regulator *(CLASP) & original... 0.09 OrthoFinder output from all 47 species
Dde_g10526 ATCLASP, CLASP microtubule orientation regulator *(CLASP) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01028491001 ATCLASP, CLASP CLIP-associated protein OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01028493001 ATCLASP, CLASP Cell cycle.cytokinesis.preprophase microtubule... 0.07 OrthoFinder output from all 47 species
GSVIVT01028494001 ATCLASP, CLASP CLIP-associated protein OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_32967 ATCLASP, CLASP microtubule orientation regulator (CLASP) 0.04 OrthoFinder output from all 47 species
Gb_32968 ATCLASP, CLASP microtubule orientation regulator (CLASP) 0.03 OrthoFinder output from all 47 species
Gb_32969 ATCLASP, CLASP CLIP-associated protein OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
Len_g12938 ATCLASP, CLASP microtubule orientation regulator *(CLASP) & original... 0.03 OrthoFinder output from all 47 species
MA_33941g0020 ATCLASP, CLASP microtubule orientation regulator (CLASP) 0.04 OrthoFinder output from all 47 species
MA_7498912g0010 ATCLASP, CLASP CLIP-associated protein OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Mp4g01070.1 ATCLASP, CLASP microtubule orientation regulator (CLASP) 0.06 OrthoFinder output from all 47 species
Nbi_g05012 ATCLASP, CLASP microtubule orientation regulator *(CLASP) & original... 0.06 OrthoFinder output from all 47 species
Ore_g16654 ATCLASP, CLASP microtubule orientation regulator *(CLASP) & original... 0.02 OrthoFinder output from all 47 species
Pir_g16723 ATCLASP, CLASP microtubule orientation regulator *(CLASP) & original... 0.03 OrthoFinder output from all 47 species
Sam_g09000 No alias microtubule orientation regulator *(CLASP) & original... 0.02 OrthoFinder output from all 47 species
Smo79454 ATCLASP, CLASP Cell cycle.cytokinesis.preprophase microtubule... 0.02 OrthoFinder output from all 47 species
Solyc06g008040.3.1 ATCLASP, CLASP,... microtubule orientation regulator (CLASP) 0.04 OrthoFinder output from all 47 species
Zm00001e007629_P001 ATCLASP, CLASP,... microtubule orientation regulator (CLASP) 0.13 OrthoFinder output from all 47 species
Zm00001e041199_P003 ATCLASP, CLASP,... microtubule orientation regulator (CLASP) 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007030 Golgi organization IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
BP GO:0032012 regulation of ARF protein signal transduction IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046578 regulation of Ras protein signal transduction IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:1902531 regulation of intracellular signal transduction IEP HCCA
InterPro domains Description Start Stop
IPR024395 CLASP_N_dom 287 502
IPR000357 HEAT 162 190
No external refs found!