1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os04g42760.1

LOC_Os04g42760.1 (LOC_Os04g42760)


Aliases : LOC_Os04g42760

Description : AGP beta-1,6-galactosyltransferase


Gene families : OG0002166 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002166_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g42760.1
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
Als_g13677 No alias beta-1,6-galactosyltransferase *(GALT29) & original... 0.03 OrthoFinder output from all 47 species
Aob_g05323 No alias beta-1,6-galactosyltransferase *(GALT29) & original... 0.02 OrthoFinder output from all 47 species
Aop_g07751 No alias beta-1,6-galactosyltransferase *(GALT29) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene23703.t1 Aspi01Gene23703 beta-1,6-galactosyltransferase *(GALT29) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene41502.t1 Aspi01Gene41502 beta-1,6-galactosyltransferase *(GALT29) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene54870.t1 Aspi01Gene54870 beta-1,6-galactosyltransferase *(GALT29) & original... 0.03 OrthoFinder output from all 47 species
Dac_g20204 No alias beta-1,6-galactosyltransferase *(GALT29) & original... 0.02 OrthoFinder output from all 47 species
LOC_Os01g63970.1 LOC_Os01g63970 AGP beta-1,6-galactosyltransferase 0.06 OrthoFinder output from all 47 species
LOC_Os12g05550.1 LOC_Os12g05550 AGP beta-1,6-galactosyltransferase 0.04 OrthoFinder output from all 47 species
Len_g15012 No alias beta-1,6-galactosyltransferase *(GALT29) & original... 0.02 OrthoFinder output from all 47 species
Lfl_g13793 No alias beta-1,6-galactosyltransferase *(GALT29) & original... 0.03 OrthoFinder output from all 47 species
Lfl_g15835 No alias beta-1,6-galactosyltransferase *(GALT29) & original... 0.02 OrthoFinder output from all 47 species
MA_10437278g0030 No alias AGP beta-1,6-galactosyltransferase 0.04 OrthoFinder output from all 47 species
MA_180941g0010 No alias AGP beta-1,6-galactosyltransferase 0.02 OrthoFinder output from all 47 species
Mp5g13750.1 No alias AGP beta-1,6-galactosyltransferase 0.02 OrthoFinder output from all 47 species
Nbi_g06969 No alias beta-1,6-galactosyltransferase *(GALT29) & original... 0.03 OrthoFinder output from all 47 species
Ore_g00337 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g21970 No alias beta-1,6-galactosyltransferase *(GALT29) & original... 0.03 OrthoFinder output from all 47 species
Spa_g28132 No alias beta-1,6-galactosyltransferase *(GALT29) & original... 0.05 OrthoFinder output from all 47 species
Zm00001e024135_P001 Zm00001e024135 AGP beta-1,6-galactosyltransferase 0.06 OrthoFinder output from all 47 species
Zm00001e041193_P001 Zm00001e041193 Sialyltransferase-like protein 3 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006486 protein glycosylation IEA Interproscan
MF GO:0008373 sialyltransferase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0010333 terpene synthase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
CC GO:0031012 extracellular matrix IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0046903 secretion IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:0140352 export from cell IEP HCCA
InterPro domains Description Start Stop
IPR001675 Glyco_trans_29 140 360
No external refs found!