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  5. LOC_Os04g41380.1

LOC_Os04g41380.1 (LOC_Os04g41380)


Aliases : LOC_Os04g41380

Description : Disease resistance RPP13-like protein 4 OS=Arabidopsis thaliana (sp|q38834|r13l4_arath : 152.0)


Gene families : OG0012065 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0012065_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g41380.1
Cluster HCCA: Cluster_118

Target Alias Description ECC score Gene Family Method Actions
AT5G45500 No alias RNI-like superfamily protein 0.04 OrthoFinder output from all 47 species
GSVIVT01015778001 No alias Disease resistance RPP13-like protein 4 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os11g42100.1 LOC_Os11g42100 Disease resistance RPP13-like protein 4 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Zm00001e022699_P001 Zm00001e022699 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!