1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os04g40940.1

LOC_Os04g40940.1 (MAD2, LOC_Os04g40940)


Aliases : MAD2, LOC_Os04g40940

Description : MAD2 spindle assembly checkpoint protein


Gene families : OG0006342 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006342_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g40940.1

Target Alias Description ECC score Gene Family Method Actions
AT3G25980 MAD2 DNA-binding HORMA family protein 0.11 OrthoFinder output from all 47 species
Adi_g010672 MAD2 spindle assembly checkpoint protein *(MAD2) & original... 0.02 OrthoFinder output from all 47 species
Aev_g19678 MAD2 spindle assembly checkpoint protein *(MAD2) & original... 0.03 OrthoFinder output from all 47 species
Ala_g19589 MAD2 spindle assembly checkpoint protein *(MAD2) & original... 0.06 OrthoFinder output from all 47 species
Als_g12979 MAD2 spindle assembly checkpoint protein *(MAD2) & original... 0.04 OrthoFinder output from all 47 species
Aop_g02412 MAD2 spindle assembly checkpoint protein *(MAD2) & original... 0.13 OrthoFinder output from all 47 species
Ceric.39G059300.1 MAD2, Ceric.39G059300 spindle assembly checkpoint protein *(MAD2) & original... 0.05 OrthoFinder output from all 47 species
Dac_g10221 MAD2 spindle assembly checkpoint protein *(MAD2) & original... 0.08 OrthoFinder output from all 47 species
Dac_g10764 MAD2 spindle assembly checkpoint protein *(MAD2) & original... 0.08 OrthoFinder output from all 47 species
Dcu_g12404 MAD2 spindle assembly checkpoint protein *(MAD2) & original... 0.1 OrthoFinder output from all 47 species
GSVIVT01010325001 MAD2 Cell cycle.mitosis and meiosis.sister chromatid... 0.1 OrthoFinder output from all 47 species
Gb_04850 MAD2 MAD2 spindle assembly checkpoint protein 0.09 OrthoFinder output from all 47 species
Len_g58649 MAD2 spindle assembly checkpoint protein *(MAD2) & original... 0.06 OrthoFinder output from all 47 species
MA_19675g0010 MAD2 MAD2 spindle assembly checkpoint protein 0.03 OrthoFinder output from all 47 species
Mp6g18990.1 MAD2 MAD2 spindle assembly checkpoint protein 0.07 OrthoFinder output from all 47 species
Msp_g00312 MAD2 spindle assembly checkpoint protein *(MAD2) & original... 0.04 OrthoFinder output from all 47 species
Ore_g40517 MAD2 spindle assembly checkpoint protein *(MAD2) & original... 0.03 OrthoFinder output from all 47 species
Ppi_g00534 MAD2 spindle assembly checkpoint protein *(MAD2) & original... 0.03 OrthoFinder output from all 47 species
Sam_g11104 No alias spindle assembly checkpoint protein *(MAD2) & original... 0.1 OrthoFinder output from all 47 species
Smo111490 MAD2 Cell cycle.mitosis and meiosis.sister chromatid... 0.04 OrthoFinder output from all 47 species
Spa_g52388 MAD2 spindle assembly checkpoint protein *(MAD2) & original... 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR003511 HORMA_dom 16 191
No external refs found!