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Aliases : LOC_Os04g38970
Description : RING-C2-class E3 ligase
Gene families : OG0001463 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001463_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT3G48070 | No alias | RING/U-box superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| AT5G62910 | No alias | RING/U-box superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g08054 | No alias | E3 ubiquitin ligase *(PIRE) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g12899 | No alias | E3 ubiquitin ligase *(PIRE) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g12443 | No alias | E3 ubiquitin ligase *(PIRE) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g03802 | No alias | E3 ubiquitin ligase *(PIRE) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g05644 | No alias | E3 ubiquitin ligase *(PIRE) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01007838001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01032580001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.06 | OrthoFinder output from all 47 species | |
| Lfl_g01349 | No alias | E3 ubiquitin ligase *(PIRE) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g28117 | No alias | E3 ubiquitin ligase *(PIRE) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g15798 | No alias | E3 ubiquitin ligase *(PIRE) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g15078 | No alias | E3 ubiquitin ligase *(PIRE) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g20335 | No alias | E3 ubiquitin ligase *(PIRE) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0016.g006929 | No alias | E3 ubiquitin ligase *(PIRE) & original description: CDS=177-1049 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0100.g019693 | No alias | E3 ubiquitin ligase *(PIRE) & original description: CDS=273-1325 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g13385 | No alias | E3 ubiquitin ligase *(PIRE) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g37146 | No alias | E3 ubiquitin ligase *(PIRE) & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
| MF | GO:0004386 | helicase activity | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| MF | GO:0008270 | zinc ion binding | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043169 | cation binding | IEP | HCCA |
| MF | GO:0046872 | metal ion binding | IEP | HCCA |
| MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |