LOC_Os04g38860.2 (LOC_Os04g38860)


Aliases : LOC_Os04g38860

Description : amino acid transporter (LHT)


Gene families : OG0000789 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000789_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g38860.2

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00005p00198670 LHT1,... Solute transport.carrier-mediated transport.APC... 0.04 OrthoFinder output from all 47 species
AT1G24400 LHT2, AATL2, ATLHT2 lysine histidine transporter 2 0.03 OrthoFinder output from all 47 species
AT1G48640 No alias Transmembrane amino acid transporter family protein 0.04 OrthoFinder output from all 47 species
AT3G01760 No alias Transmembrane amino acid transporter family protein 0.06 OrthoFinder output from all 47 species
Adi_g016074 No alias amino acid transporter *(LHT) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g22054 LHT1 amino acid transporter *(LHT) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g02211 LHT1 amino acid transporter *(LHT) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g14806 LHT2, AATL2, ATLHT2 amino acid transporter *(LHT) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene29220.t1 LHT1, Aspi01Gene29220 amino acid transporter *(LHT) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene59630.t1 LHT1, Aspi01Gene59630 amino acid transporter *(LHT) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene69019.t1 LHT1, Aspi01Gene69019 amino acid transporter *(LHT) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene69036.t1 LHT1, Aspi01Gene69036 amino acid transporter *(LHT) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0037.g025973 LHT1 amino acid transporter *(LHT) & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.1Z032700.1 Ceric.1Z032700 amino acid transporter *(LHT) & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g05468 LHT1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g16448 LHT1 amino acid transporter *(LHT) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g12864 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22419 LHT2, AATL2, ATLHT2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g16810 LHT1 amino acid transporter *(LHT) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01008696001 No alias Solute transport.carrier-mediated transport.APC... 0.03 OrthoFinder output from all 47 species
GSVIVT01010333001 LHT1 Solute transport.carrier-mediated transport.APC... 0.04 OrthoFinder output from all 47 species
GSVIVT01010335001 LHT2, AATL2, ATLHT2 Solute transport.carrier-mediated transport.APC... 0.05 OrthoFinder output from all 47 species
GSVIVT01010349001 LHT2, AATL2, ATLHT2 Solute transport.carrier-mediated transport.APC... 0.04 OrthoFinder output from all 47 species
GSVIVT01010355001 LHT1 Solute transport.carrier-mediated transport.APC... 0.06 OrthoFinder output from all 47 species
GSVIVT01011938001 No alias Solute transport.carrier-mediated transport.APC... 0.03 OrthoFinder output from all 47 species
Gb_30296 LHT2, AATL2, ATLHT2 amino acid transporter (LHT) 0.04 OrthoFinder output from all 47 species
Len_g47907 LHT1 amino acid transporter *(LHT) & original description: none 0.03 OrthoFinder output from all 47 species
MA_25045g0010 LHT1 amino acid transporter (LHT) 0.03 OrthoFinder output from all 47 species
Mp2g21590.1 No alias amino acid transporter (LHT) 0.04 OrthoFinder output from all 47 species
Mp6g02000.1 LHT2, AATL2, ATLHT2 amino acid transporter (LHT) 0.02 OrthoFinder output from all 47 species
Ppi_g02153 LHT1 amino acid transporter *(LHT) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g111040.2.1 LHT2, AATL2,... amino acid transporter (LHT) 0.02 OrthoFinder output from all 47 species
Solyc05g014530.1.1 LHT2, AATL2,... amino acid transporter (LHT) 0.03 OrthoFinder output from all 47 species
Spa_g40632 No alias amino acid transporter *(LHT) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g19622 LHT1 amino acid transporter *(LHT) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e029255_P001 LHT1, Zm00001e029255 Lysine histidine transporter 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e029256_P001 LHT1, Zm00001e029256 amino acid transporter (LHT) 0.03 OrthoFinder output from all 47 species
Zm00001e029258_P001 LHT1, Zm00001e029258 amino acid transporter (LHT) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
InterPro domains Description Start Stop
IPR013057 AA_transpt_TM 23 428
No external refs found!