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  5. LOC_Os04g35280.1

LOC_Os04g35280.1 (CINV2, LOC_Os04g35280)


Aliases : CINV2, LOC_Os04g35280

Description : alkaline sucrose-specific invertase (CIN)


Gene families : OG0000598 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000598_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g35280.1
Cluster HCCA: Cluster_173

Target Alias Description ECC score Gene Family Method Actions
Aop_g11777 CINV2 alkaline sucrose-specific invertase *(CIN) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene12438.t1 INV-E,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g17596 No alias alkaline sucrose-specific invertase *(CIN) & original... 0.02 OrthoFinder output from all 47 species
Dde_g22613 CINV2 alkaline sucrose-specific invertase *(CIN) & original... 0.02 OrthoFinder output from all 47 species
Pir_g30405 CINV2 alkaline sucrose-specific invertase *(CIN) & original... 0.02 OrthoFinder output from all 47 species
Sam_g19101 No alias alkaline sucrose-specific invertase *(CIN) & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR024746 Glyco_hydro_100 109 547
No external refs found!